Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2330 ATGGGAATGATTTTCAAGGCACTAGAAGAAGTTGGAAAGTTCTACAAACATTATTCCAAACATGCCGGTTTTTCTACGAAAATAAGGAACACGACTCGGGACGGAGACAAGATTAAGAATCAACTAATTGTATGCACCAGAGAGGGGAGATGGAAATCCAAGATATCTCCAACTTTGAAGACAAACCCTTCAGCTGGGTTAAATTGTCTGGCTAGAATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCCAAAGTTGTTTTGAATCACACACATCCTTGTTGTCTAGACCAGGCTGAGATGCTCAAAGAACACAGGGAGCTTAGCATGTTCGTGTGTCGCACCATCGAAATCCACAAGGAAGCTGGAATCAGACCGAGCAAAACTTACCAATCATTTTTGTACGAGGATCAGCATATATGGATTCCAATTTACTTGGATCACCACTTCTGGGCTGGGATGAGAAGCACACAAAGGAGCGAGAGCATGCATTCATTTTTCAATAAGTTCATCACACGGAATAGCTCCTTGAGACAATTTAGAGAATTCGATGCTGTAGATTTTCACATTGTGATACCGTGCGCAACAAAATCAGCAATAGAGGCACATTTTCAGCATCTATATACCCATGAGAAGTTCAAGGAAGTTCAAGCTCAATTCAGAGGCAAAGTGAACTGTATCACAAGATTAATGCATTCCGCCCTAGGTTTCACAACATATGAAGTCATAGAGCAGGTTTCCAACTCCACATTCAACAAGTTTGTCGTCACCTACGACGCAGTATCACGAGATGTAAAGTGCCATTTCTTGCTGTTTGAGTCTAGGGGCATATTGTACCGCCATTCCCTAAGCGTCCTAAGCTTTGAGCGAGTGGATAACGTGGCACCGAAATACATATTGGAACGGTGGAGCAAGAACATAAAGAGGAGGAATACACACATCAAGAGCAGTCAAGATGAACCTCTACTGGAGCCGAGAAGTAAGAGATTTGACAAATTGGTGTTTCGGTCGCACAATATATGTGAATTTGCATCCGAGTCTGAAGAGTTGACCGGAATTCTGCACCGAGCATTTGACAAGTTCAAGTTGAACCTTTTAGACTCCGGATCATCGATTCAGTCAAGCTCCACTCTTTACAATGCACCAGATATGAATTATCCAAGAGAGGATTGTACAAGTACAATGATTGCAGTCACTGGAGAACCTGGAACAAATCAGCAGCCAGACGGTTCCAAGAAATATATAAATTAA 1260 0.419 MGMIFKALEEVGKFYKHYSKHAGFSTKIRNTTRDGDKIKNQLIVCTREGRWKSKISPTLKTNPSAGLNCLARIYVHIMKDVGLWTISKVVLNHTHPCCLDQAEMLKEHRELSMFVCRTIEIHKEAGIRPSKTYQSFLYEDQHIWIPIYLDHHFWAGMRSTQRSESMHSFFNKFITRNSSLRQFREFDAVDFHIVIPCATKSAIEAHFQHLYTHEKFKEVQAQFRGKVNCITRLMHSALGFTTYEVIEQVSNSTFNKFVVTYDAVSRDVKCHFLLFESRGILYRHSLSVLSFERVDNVAPKYILERWSKNIKRRNTHIKSSQDEPLLEPRSKRFDKLVFRSHNICEFASESEELTGILHRAFDKFKLNLLDSGSSIQSSSTLYNAPDMNYPREDCTSTMIAVTGEPGTNQQPDGSKKYIN* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2330 419 PANTHER OS03G0843700 PROTEIN 135 372 - -
Amo16g2330 419 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 135 372 IPR031052 GO:0006355
Amo16g2330 419 Pfam FAR1 DNA-binding domain 13 97 IPR004330 -
Amo16g2330 419 PANTHER OS03G0843700 PROTEIN 2 107 - -
Amo16g2330 419 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 107 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2330 Amo-Chr16 97492875 97495659 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g2330 FAR1 1.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2330 - - adu:107484182 433.721