Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2309 ATGAAGGGTAAGGAAGGTAAAATTGCCGTGGTAGTAGGAATTGTAACCGATGATATCAGAGTGTATGAAGTTCCTGCATTGACTGCACTCAGGTTTACAAAGACTGCACGTGCTAGAATAGAGAAGGCCGATGGTGAATGCTTGACATTTGATTAG 156 0.4231 MKGKEGKIAVVVGIVTDDIRVYEVPALTALRFTKTARARIEKADGECLTFD* 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2309 51 Pfam Ribosomal protein 60S L18 and 50S L18e 3 51 IPR021131 -
Amo16g2309 51 PANTHER 60S RIBOSOMAL PROTEIN L18-2-LIKE 1 51 - -
Amo16g2309 51 Gene3D - 1 51 - -
Amo16g2309 51 SUPERFAMILY Ribosomal proteins L15p and L18e 4 50 IPR036227 -
Amo16g2309 51 PANTHER 60S RIBOSOMAL PROTEIN L18 1 51 IPR000039 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2309 Amo-Chr16 95192427 95192682 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2309 1 51 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 73.585 3.56e-22 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2309 K02883 - pop:7491291 90.8929