Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2273 ATGATCATTCCGGAGAAGAACCGCAAGGAGATCTGCAAGTACCTATTCCAAGAGGGAGTATGCTACGCGAAGAAGGACTTCAATCTTGCGAAACACCCTGAGATCGATGTGCCGAATCTGCAGGTGATTAAGCTGATGCAGAGCTTCAAGTCGAAGGAGTACGTTAGAGAGACGTTTGCCTGGATGCACTATTATTGGTTCCTCACCAACGACGGCATCGAGCATCTCAGGACTTACCTCAACCTTCCTTCTGAGATTGTCCCCGCCACTCTCAAGAAGCAGGCCAAGCTATCTGGCAGGCCTTTTGGCGGCCCACCGGGTGACCGCCCCAGGGGTCCACCTCGCTTTGAGGGAGAGCGCAGATTTGGTGATCGTGATGGATACCGTGGAGGTCCCCGTGGACCTGGTGGTGATTTTGGAGGAGACAAGGGTGGTGCTCCTGCTGACTACAGACCTTCTTTTGGGGGTGCTGGTGGAAGGCCTGGCTTTGGTCGTGGTGCTGGTGGTTTTGGAGGAACTGGAATGGACCTAACTTGGTTGACTAGCCTCATTAGCATCACCAGAAGATCATAG 573 0.534 MIIPEKNRKEICKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWFLTNDGIEHLRTYLNLPSEIVPATLKKQAKLSGRPFGGPPGDRPRGPPRFEGERRFGDRDGYRGGPRGPGGDFGGDKGGAPADYRPSFGGAGGRPGFGRGAGGFGGTGMDLTWLTSLISITRRS* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2273 190 PANTHER 40S RIBOSOMAL PROTEIN S10 1 172 IPR037447 -
Amo16g2273 190 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 1 172 - -
Amo16g2273 190 Gene3D - 1 104 IPR036388 -
Amo16g2273 190 MobiDBLite consensus disorder prediction 96 162 - -
Amo16g2273 190 Pfam Plectin/S10 domain 3 94 IPR005326 -
Amo16g2273 190 MobiDBLite consensus disorder prediction 112 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2273 Amo-Chr16 91433539 91436498 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2273 1 154 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 83.871 3.05e-75 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2273 K02947 K09422 gmx:100500445 217.624