Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2234 ATGCTGCAAGTTCTGTCAAGGGGAGGGGAGGCTGTAGAGATGACTACTGACCATGAACCTAATACTGAGTGGGGCAGCATTGAGAACAGAGGTGGCTTTGTCTCAAACATGCCAGTTTATAAGAGGATGATGAAGATCCCAAAACTAGTTCATCAGTTCTATTTTCTGAAGCTTTGGCCATCATCAAAGCCTGATTCAATATCTCAAATCAAGAAACAAGAGCTCACGGTGGAGAAAATGAACCGAGACATTCGTGATAAAATCAAAGAGAAAATTTCAGAAAAGGACTATGTTGCGTCTGGGATGAGAAGCTCATACTACTGGAAAATGGAATGGAGACGCCGCATCGCGCGAAAAGGGAAGATACTAAGTAACTTGTATGTGGTTCTTGATGAATTGTGTTTCATGAACAATGCACCTAGGAGAAGATCTAAGAAGGAGAAATGCTTCACGGAAGAAGAGATTGATAACTATGTAAGAGCTTAG 486 0.4156 MLQVLSRGGEAVEMTTDHEPNTEWGSIENRGGFVSNMPVYKRMMKIPKLVHQFYFLKLWPSSKPDSISQIKKQELTVEKMNRDIRDKIKEKISEKDYVASGMRSSYYWKMEWRRRIARKGKILSNLYVVLDELCFMNNAPRRRSKKEKCFTEEEIDNYVRA* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2234 161 Coils Coil 70 90 - -
Amo16g2234 161 MobiDBLite consensus disorder prediction 1 25 - -
Amo16g2234 161 PANTHER RNA-BINDING PROTEIN YLMH-RELATED 26 153 - -
Amo16g2234 161 PANTHER PUMP INTERACTOR, PUTATIVE-RELATED 26 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2234 Amo-Chr16 88813310 88814394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2234 4 38 PP2C-type Phosphatase Gene Family AT1G34750 71.429 1.61e-11 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2234 K17506 - adu:107462202 213.386