Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2141 ATGTTGTGGTTGTCCACTGTAAGGCTGGAACGAACAAGTTCTTTCCAATTGCTGAGGAGTCAATGGATTACTATAATCAGAAATGATGTGTTGATGGAAAAGGACTTGTTCTGCCCAGTCAGATTGGAAGCTGTGAAACATTTTGATCCTGGTCCTAGTGTTCCTCACAGCCATACCAAGCCTTATGTACGATCTAAGGGAAGGAAGTTTGAGAGGGCTAGAGGAAGAAAGAACAACAAAGGACTTAGTGTTTAA 255 0.4196 MLWLSTVRLERTSSFQLLRSQWITIIRNDVLMEKDLFCPVRLEAVKHFDPGPSVPHSHTKPYVRSKGRKFERARGRKNNKGLSV* 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2141 84 PANTHER 60S RIBOSOMAL PROTEIN L18 42 82 IPR000039 GO:0003735|GO:0005840|GO:0006412
Amo16g2141 84 Pfam Ribosomal protein 60S L18 and 50S L18e 43 82 IPR021131 -
Amo16g2141 84 Gene3D - 30 83 - -
Amo16g2141 84 PANTHER 60S RIBOSOMAL PROTEIN L18-1-RELATED 42 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2141 Amo-Chr16 79129790 79130340 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2141 43 84 Cytoplasmic Ribosomal Protein Gene Family AT3G05590 69.048 5.92e-18 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2141 K02883 - tcc:18600499 78.9517