Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2140 ATGAATTTGGAGCGGAAAGATCGTAAGCTTGATCCTCAAATTGAAGAGCAATTTGGTGGTGGGAGATTGCTAGCTTTCATTGCTTCTCGACCTGATCAATATGGCAGGGCTGACGGCTATATTTTGGAAGATAAGGAGCTTGAATTTTATATGAAGAAAATCCAGAAGGGAAAGGGTGCTACCTAA 186 0.414 MNLERKDRKLDPQIEEQFGGGRLLAFIASRPDQYGRADGYILEDKELEFYMKKIQKGKGAT* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2140 61 PANTHER 40S RIBOSOMAL PROTEIN S8 4 60 IPR001047 GO:0003735|GO:0005840|GO:0006412
Amo16g2140 61 Gene3D - 1 58 - -
Amo16g2140 61 PANTHER 40S RIBOSOMAL PROTEIN S8 4 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2140 Amo-Chr16 78976158 78976947 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2140 5 51 Cytoplasmic Ribosomal Protein Gene Family AT5G20290 70.213 3.20e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2140 K02995 - oeu:111368810 92.8189