Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2122 ATGTTCCTCCATTTTCAGGATGCCGCTGAAGCATTTCTACATCTATTGTGCTCATTGAGAGAAGAAATTGGAAGTTCCAAGATCTCAATTAACTTAGAACAATTTGATTGTTTGCCTCTTTCACCTGTACTTAGTGGTTCTACCCTGATATTTGGATGTGCACTGCTGGATTGCCTGAAGCAATTCATTGTTGCTGAGCATTTTGAGAACTATCACTGTCACTACTGTTGGCATAATGCTGCGATTAAGTATCTTTCATTAATGGAACGAAATGAGAGGCATTTTAGAAAGTTGTTTGGAAGGAGTGACACAGGCAACAAAATTGGGACCTATAGAATTACCTTGTGTACCAATTTTCACAATGTACCTTTTTATGTGGCTGCACCACTGACTTCAATTGATTTGTCACTTTCTTTCGGAGAAGAAATCGTCATCGAGGAGAGATCTCCGAAGGAGTTGTTGAACATGCGAGGAGGACTTGGAGAGCAAGTTGCTGCCTCATGA 504 0.4048 MFLHFQDAAEAFLHLLCSLREEIGSSKISINLEQFDCLPLSPVLSGSTLIFGCALLDCLKQFIVAEHFENYHCHYCWHNAAIKYLSLMERNERHFRKLFGRSDTGNKIGTYRITLCTNFHNVPFYVAAPLTSIDLSLSFGEEIVIEERSPKELLNMRGGLGEQVAAS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2122 167 SUPERFAMILY NagB/RpiA/CoA transferase-like 103 158 IPR037171 -
Amo16g2122 167 Gene3D - 97 167 IPR042529 -
Amo16g2122 167 Pfam Initiation factor 2 subunit family 103 158 IPR000649 GO:0044237
Amo16g2122 167 PANTHER METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE 102 167 - -
Amo16g2122 167 SUPERFAMILY Cysteine proteinases 5 88 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2122 Amo-Chr16 77234916 77237296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2122 97 166 Eukaryotic Initiation Factors Gene Family AT2G05830 65.714 2.36e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2122 K08963 - aip:110263737 177.178