Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2075 ATGAGAGATGCACGGAAGACAGAGGAGCAGAAACGCGACAAGGGGGAGAAGGGCGAGTCACTAAGAAAAATGAACCACCCAAATATTGTGAAGCTAAAGGAAGTTATTCGAGAAAGTGACATTCTGTACTTTGTTTTTGAGTACATGGAATGCAACCTGTACCAACTTATGAAAGACAGGGAGAAGATGTTTTCTGAGGGTGAAGTTAGGAATTGGTGTTTTCAAGTTTTCCAAGGTCTTGCATATATGCACCAGTGGGGATACTTCCACCGTTATCTGAAGCCTGTTGTTATTGTGCAGCAAATGGAGATTTATACTATGGTCTATTCTGATTTTGGCCTAGCACGTGAGATCAGTTCACAATCACCCTACACTGAGTATGTCTCCACACGGTGGTATCGTGCTCCTGAAGTGCTACTTCAATCTTATCTGTATAGCTCCAAAGTTGACATGTGGGCAATGGGTGCTATAATGGCTGAACTGTTCTCTCTTCGTCCTCTTTTCCCTGGTGCCAGGTAG 519 0.4374 MRDARKTEEQKRDKGEKGESLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKMFSEGEVRNWCFQVFQGLAYMHQWGYFHRYLKPVVIVQQMEIYTMVYSDFGLAREISSQSPYTEYVSTRWYRAPEVLLQSYLYSSKVDMWAMGAIMAELFSLRPLFPGAR* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2075 172 MobiDBLite consensus disorder prediction 1 20 - -
Amo16g2075 172 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 19 171 - -
Amo16g2075 172 Gene3D Phosphorylase Kinase; domain 1 18 46 - -
Amo16g2075 172 SUPERFAMILY Protein kinase-like (PK-like) 20 170 IPR011009 -
Amo16g2075 172 Pfam Protein kinase domain 18 169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2075 172 ProSiteProfiles Protein kinase domain profile. 1 172 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2075 172 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 19 171 - -
Amo16g2075 172 SMART serkin_6 9 171 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2075 172 Gene3D Transferase(Phosphotransferase) domain 1 47 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2075 Amo-Chr16 70761179 70762543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2075 21 170 Core Cell Cycle Gene Families AT3G48750 41.176 4.39e-35 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Amo16g2075 Pkinase 1.3e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2075 K08829 - gmx:100810150 269.24