Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2051 ATGAATTGCTTGAATGCTTTTTTTCGTTCAAGGCAATCGAAGATTCTAGAATCTCGATCGTGGTTTTCTCCAGAAGCTATGGGGATTCGACAAAATGTGCTTCTTGATGATGACATGGTTGCTCATGTGACTAATTTTGGATTAGCAAGGCTTCTCTCAATGACTAATGGTGATCCTCATAATCAATCTAGCACAACTATGTTAAAGGGAACTATTGGATATGCTCCTCCGGAAAAACTAAAAGAGGAAGTGAAAGCAAAAAATATTATTTTATTGTTTTCACTTTTTAAATGTGATATTGGCATGTTGTTTTCAGAGTATGAAATGAGTTGTGAGGTGTCAATGCAAGGTAATGTGTATTCTTTTGGAATTCTAGTATTAGAAATGGTGACTGGAAGGAGGCCAATGGAAGAAATGTTTAAAGATGATAACAATCTAGCCATGGTGCAAATTGCGAGCTTCCCAGAGACAATCTTGTGCAATGGCCATGGCCAAGGCTAA 501 0.3733 MNCLNAFFRSRQSKILESRSWFSPEAMGIRQNVLLDDDMVAHVTNFGLARLLSMTNGDPHNQSSTTMLKGTIGYAPPEKLKEEVKAKNIILLFSLFKCDIGMLFSEYEMSCEVSMQGNVYSFGILVLEMVTGRRPMEEMFKDDNNLAMVQIASFPETILCNGHGQG* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2051 166 Gene3D Transferase(Phosphotransferase) domain 1 30 161 - -
Amo16g2051 166 Pfam Protein tyrosine and serine/threonine kinase 31 147 IPR001245 GO:0004672|GO:0006468
Amo16g2051 166 SUPERFAMILY Protein kinase-like (PK-like) 31 143 IPR011009 -
Amo16g2051 166 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 31 157 - -
Amo16g2051 166 ProSiteProfiles Protein kinase domain profile. 1 166 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g2051 166 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 31 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2051 Amo-Chr16 67852660 67853573 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2051 31 159 Receptor kinase-like Gene Family AT3G47090 40.000 6.58e-22 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Amo16g2051 PK_Tyr_Ser-Thr 1.6e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2051 - - ahf:112708869 154.451