Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g2050 ACCAACCCGTGCGCTCCACCTAGCCGTCGAACTGCTCTCTTTTGTCACCGCCGTGAGTTCCCTAAACCCACCACCAGACAATACACTCACACAACACCAATACTCTGTATTCATGATAGAGGTATTCAGCTTAATGGTCTTGGCATGAAGAGCTTCATGACTTATGAAAGCAATGTACTTTTTGCCCTTCGCTTCATGATTGATTGCAGTATAGCTGGTGTTGACCTTGATATTATAATTGGATATAACATCTGCAAATTTGACCTGCCATATCTTATTGAGAGAGCTCAAGCCTTGAAAATAGCAGAATTTCCTATTATGGGCCGTATCAGGAACAGTAGGATCCGAGTAAAGGATACAACTTTTTCATCTAGACAGTATGGAACCAGAGAAAGTAAAGAAGTTGTTGTAGAAGGGAGAGTTATGCAAAGAGACTACAAATTAAGTTCTTATTCTTTGAATTCTGTTTCAGCACACTTTCTTTCTGAGCAGAAACTAGGAGGCGCCTTGCTGTGTATTGTTTAA 525 0.4076 TNPCAPPSRRTALFCHRREFPKPTTRQYTHTTPILCIHDRGIQLNGLGMKSFMTYESNVLFALRFMIDCSIAGVDLDIIIGYNICKFDLPYLIERAQALKIAEFPIMGRIRNSRIRVKDTTFSSRQYGTRESKEVVVEGRVMQRDYKLSSYSLNSVSAHFLSEQKLGGALLCIV* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g2050 174 SUPERFAMILY Ribonuclease H-like 74 166 IPR012337 -
Amo16g2050 174 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 71 165 - -
Amo16g2050 174 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 23 73 - -
Amo16g2050 174 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 23 73 - -
Amo16g2050 174 Pfam DNA polymerase family B, exonuclease domain 74 156 IPR006133 -
Amo16g2050 174 Gene3D - 16 167 IPR036397 GO:0003676
Amo16g2050 174 PANTHER DNA POLYMERASE DELTA CATALYTIC SUBUNIT 71 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g2050 Amo-Chr16 67747525 67749778 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g2050 37 73 Core DNA Replication Machinery Family AT5G63960 72.973 1.80e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g2050 K02327 - ahf:112769782 169.088