Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1993 ATGACCGTTAGAGAATTGGGTTTATCTGATACTGTTCTGGACTCGTTGGCTCAATGCTTTTCTAGAAATACTAGTGAAATTAAGAGATATGAATCACCATCAAACGTCTTATACATGCTAGATATGAAACTCTTAGTAATGAAGACAATGCTGCTAGGGATTCCAAGAATGGAGATACCAAAGATATTTCTCAAAGTGAAAAGTCTTTTCTGGAAAAGGATCTTGAAGCAGCTCTTGACTCCTTTGACAATCTTTTTTGTCGACGCTGTCTTGTTTTCGATTGCCAATTACATGGATGTTCCCAGGATCTTGTCTTCCTCGCTGAGAAGCAACCTCTGGAACCCTCTTGATACTGAACATGAACCATGTGGGCTGAATTGTTTTAAATTGGTACTTAAATTAGGAAGGTTTTTCAATGCTACCTCTTCTGCCCAGGCTGATGTTGAAGAGAAATGTTCAGGTAGTTCTTTATCTAGGAAGAAGTCTTTTGCTAAAAGATATTTGGGAGAAACAGGTCAGCATATGCTTGGATCAAATGTATTACCTGTGCCTTCTCTGATGCTTACTTTCATGCGTTGGACCCCTAATCTTCATCTTCGATTTGTTCATGCTGTTCAAAGACTTGGAGGACAAGAGAGAGCAACACCAAAATTGGTTCTTCAATTGATGAATATCAAAGGTTTAATTATTACTCATGTCAAGAGTCATTTACAGGAGCAAGAAGGTAGAGGACACAAATAA 741 0.3833 MTVRELGLSDTVLDSLAQCFSRNTSEIKRYESPSNVLYMLDMKLLVMKTMLLGIPRMEIPKIFLKVKSLFWKRILKQLLTPLTIFFVDAVLFSIANYMDVPRILSSSLRSNLWNPLDTEHEPCGLNCFKLVLKLGRFFNATSSAQADVEEKCSGSSLSRKKSFAKRYLGETGQHMLGSNVLPVPSLMLTFMRWTPNLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLIITHVKSHLQEQEGRGHK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1993 246 SUPERFAMILY Homeodomain-like 191 239 IPR009057 -
Amo16g1993 246 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 191 238 IPR044848 GO:0003700
Amo16g1993 246 PANTHER MYB-LIKE HTH TRANSCRIPTIONAL REGULATOR FAMILY PROTEIN 191 238 - -
Amo16g1993 246 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 191 238 IPR006447 GO:0003677
Amo16g1993 246 Gene3D - 189 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1993 Amo-Chr16 58396084 58397569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1993 191 238 G2-like Transcription Factor Family AT2G42660 77.083 7.73e-20 84.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Amo16g1993 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1993 - - gmx:102660246 98.9821