Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1991 ATGGCTACATGGAAGGTTGCCCCTGCTCTGGCAGCTGGTTGTGCTGCAATATTGAAGCCTTCCGAATTGGCATCTGTGTATATTTCTCAGCAGCCCTTGCAAAATCTTTGCTTCTTTTTGAGTCTTGGACATGTTTGGAGTTGGCTGACATATGCAAAGAAGTGGGCCTTCCTTCGTTCTAAGATGAAGCGCATTGGAATTGATACTGAAGCACTCAAAGAGCACTTTGGGAAGAAAATTATGGAGCTTGAGGAGGAAAAAAGAAAAGTGCAGAGGGTTTCCATGGCGATTTCTCCATCTGGTATAAACCCGGCAGTTGGCTCAAAACTCTCTCCTGGTTCTCCAGAGGCTCTTACACTAGCCAACTGGATCTGCTGCAGTTATAGGCAAGTCTGCATCTGTTGTATTGTGTTTAAGCTTTATTGTTGA 429 0.4476 MATWKVAPALAAGCAAILKPSELASVYISQQPLQNLCFFLSLGHVWSWLTYAKKWAFLRSKMKRIGIDTEALKEHFGKKIMELEEEKRKVQRVSMAISPSGINPAVGSKLSPGSPEALTLANWICCSYRQVCICCIVFKLYC* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1991 142 Coils Coil 73 93 - -
Amo16g1991 142 Pfam Aldehyde dehydrogenase family 1 26 IPR015590 GO:0016491
Amo16g1991 142 PANTHER ARID DNA-BINDING DOMAIN, ZINC FINGER, CCHC-TYPE, MEKHLA-RELATED 90 128 - -
Amo16g1991 142 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 90 128 IPR044830 GO:0003700
Amo16g1991 142 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 30 IPR016162 GO:0016491
Amo16g1991 142 SUPERFAMILY ALDH-like 1 25 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1991 Amo-Chr16 58378196 58379564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1991 90 128 Homeobox Transcription Factor Family AT5G60690 79.487 5.80e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1991 K09338 - ahf:112742636 142.51