Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1978 ATGAATGGCCAAAATGCAAAGACCAATTTCCCTTCAACAAAGAACAACCAACAATCTCATCATCATAATAACAATGCAACAACAACAACAACAACAACTTCTTCTTCTTCTTGCAATGATGATTCTTCTTTCTTGTCTCCCAAGGCACTCTCAGAGCTTCTCAGTGCAAAGCTCAAGAAGTGCTGCGGCAAGGACCCTTCTTCTCCTTCCCTCACTTGTCTCCGCCTCGACGCCGACAACTCCCACATCGGCGTCTGGCAAAAGGGCCCCGGAAGACACTCCGATTCCAGTTGGGTCATGAGGGTTGAGCTTGGCAGCAAGAACCACAACCACCAGCAAAAACAACACGAGGGTAATAAGGTCATTTTCCCATCTTCACCAAGTAATAATAACATCACTAACAACAACAACAATAATAATAATGTTGTTGTTATTGGAGAGAATGATGATGAAAATAGAATTGAAGAAGAGAACAGGGTTGCCATGCAGATGATTGAAGAGCTTCTGAATTGGAACAACTATCCATTTGGTAGTTCTTCAAGTAACAATAATAATAATTCTCAGCAGCAACAACAAGAAGATCAGAAAAGGAACCTTCCATGTCACAGTTCTTGA 615 0.4179 MNGQNAKTNFPSTKNNQQSHHHNNNATTTTTTTSSSSCNDDSSFLSPKALSELLSAKLKKCCGKDPSSPSLTCLRLDADNSHIGVWQKGPGRHSDSSWVMRVELGSKNHNHQQKQHEGNKVIFPSSPSNNNITNNNNNNNNVVVIGENDDENRIEEENRVAMQMIEELLNWNNYPFGSSSSNNNNNSQQQQQEDQKRNLPCHSS* 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1978 204 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR SHINE 2 1 173 - -
Amo16g1978 204 MobiDBLite consensus disorder prediction 175 204 - -
Amo16g1978 204 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 173 - -
Amo16g1978 204 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1978 Amo-Chr16 57583791 57584659 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1978 1 172 AP2-EREBP Transcription Factor Family AT5G11190 43.605 1.38e-33 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1978 - - lang:109326202 145.976