Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1935 ATGCCTACTGGAGGAGGCAAGTCGATGTGTTATCAGATTCCTGCACTGGCCAAAACAGGAATTGTGCTTGTTTTTTTGAGTGATAGAATTATCCCAGCTCTAGTGAACGCTTTACATAAGGAACCAGATACAGAAATTTGTGCAAGTATATTGGATTCATTGAATGAATGCTTACAGTTTTACGGATTCGACAAGAAAGGAAACCAGTGGAATGAGAGAACCGCAGGTACCGTCAAGTTCCCGAAGAACAAGGTTACTAGCCAGGATCTTGCCATGGCATTGCTATTTGTAATAGGATATGTAGGCATCACAATTGAGGAATCTCTAGCTTTCAACAAAAGTGGAATAGGACTTTTGATGGCTGTAAGCTTGTGGACTATAAGAAGTATTAGGGCTCCATCAACTGGTGTAGCTGTTTCTGAGCTAACGCTTGCATCTGCAGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGAGCTATGACTATTGTGGAAATAGTTGATGCTCATCAAGGATTTAAGCTAGTTACTGACAATATAACAACTCGAAAGCCATGA 555 0.4054 MPTGGGKSMCYQIPALAKTGIVLVFLSDRIIPALVNALHKEPDTEICASILDSLNECLQFYGFDKKGNQWNERTAGTVKFPKNKVTSQDLAMALLFVIGYVGITIEESLAFNKSGIGLLMAVSLWTIRSIRAPSTGVAVSELTLASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKP* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1935 184 Gene3D - 1 36 IPR027417 -
Amo16g1935 184 PANTHER BNAC03G40960D PROTEIN 86 184 - -
Amo16g1935 184 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 86 184 IPR045016 GO:0006814|GO:0015297
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1935 Amo-Chr16 53052359 53054202 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1935 87 184 Antiporters AT3G19490 83.673 1.04e-47 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1935 - - gmx:100779521 168.703