Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1899 ATGTGGCTGGGTTCTGGTTCTGGGGGGGGCTGGGCTGGGGCAGGGCTAACGCGCTGTCAGCTTCATCTTCTCAAACCCAGCCCTGGTCGTGGTCCTGCTTTCGGTTTGCTGCTCGCCTCATTTCTCGAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTGGCGGTGCTGCTCGCCTCATCTTCTCAAACCCAGCCCTGGTCGTGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAACCCTGGTCGTGGTTCTGCTCGCCTGTCTCTGTCGCGGTGCTCCTCGCCTGTCTCTGTCGCGGTGCTGCTCGCCTCATCTTCTCGAACCCAACCCTGGTCGTGGTCCTGCTCGCCTCTCTCTGTCGTGGTTCTGCTCCGCCTCATCATCTCCAACCCAGCCATGGTCGTGGTGCTGCTCGCCCAGCCCTGGTCGTGGTGCTGCTCGCCTCTCCTCCCGCATCTAGCATCAAGGTTTTATTTCTCTCTCTGTTTCTTCTACAGTTCCTCCTGTTACAAGGACATCAGTTTCTGGATCAAGGAATCATTTACTGAAAACATTCTGTGTGAACTTGTTAGAGGAATTGCTGGGGATCTTGTAGAAAAGACTGACACAGCCTCAGTGTTGTTAAAAGCTATTGGGTATATCAGATTCCTTCAGAGTCAAATTGAG 696 0.5603 MWLGSGSGGGWAGAGLTRCQLHLLKPSPGRGPAFGLLLASFLEPSPGRGAPRLSLWRCCSPHLLKPSPGRGAPRLSLSRCCSPHLLEPNPGRGSARLSLSRCSSPVSVAVLLASSSRTQPWSWSCSPLSVVVLLRLIISNPAMVVVLLAQPWSWCCSPLLPHLASRFYFSLCFFYSSSCYKDISFWIKESFTENILCELVRGIAGDLVEKTDTASVLLKAIGYIRFLQSQIE 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1899 232 CDD bHLH_AtbHLH_like 187 232 IPR045239 -
Amo16g1899 232 Gene3D - 175 216 IPR036690 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1899 Amo-Chr16 51188031 51189851 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1899 210 232 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 86.957 1.64e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1899 K01889 - aip:107608127 134.42