Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1897 ATGATATGGCGTTCTCTACTTCTCGCAATATGCGACCGTCTGACAAAGGCTAGGAAGAGGAGCTCTGAAGAGGAGCTCCTCGCAGACATTCTGGATTCTCCCGAGCTCACTCGATCATGCTCAAACCTGGAAAGAAGGGATATTCTTGGTAATACAATTCATCAATTCCCAGATTCAAAGTCGCAATCTTTCGAGAATTTACAGGAACTTACAGCAGGTAAAGTGGCTGCTAATCTCGAAAGCCCCAGGTCGAGAATTTACAGGAATTCACCTGTTGAAGCTTATGTGGGACAGGAGTTTGAGTCAGAAGCAGAGGCACATGCATTCTACAATGCATATGCCACGAGTGTTGGATTCATCGTACGTGTTAGTAAACTCTCTCGGTCAAGGATCGATAATTCTGCTATTGGGCAGATTTTTGTCTGCAACAAAGAGGGATACAGGATGACTGACAAGCGTGAAAATGTTATACGGCAAAGGGTTAAGACAAGGGTTGGTTGCAAGGCAATGATAATGGTAAGGAAAGTAAAATCTGGTAGCTGGGTTGTTACACGTTTTGTAAAGGAACACACACACCTTCTTGCTGGTCCAGGAGGTGGCAGAAGGGATTTCATCTACGAACAATATCCGGGTGAACGGTATAGAATTCGGGAATTAAATCAGCAGTTGACGTACAGCAGAGAAAAAGAGCATATTGACGAGTATAACGAGAGCCTATCGAAGAAAATACAGCACATAGTAGACAATGTAAAGGAGATGGAAAGCAAAGAAGAACAAAGCCAATTGAACTTTCAATTAGCCACCCTTTAA 810 0.4321 MIWRSLLLAICDRLTKARKRSSEEELLADILDSPELTRSCSNLERRDILGNTIHQFPDSKSQSFENLQELTAGKVAANLESPRSRIYRNSPVEAYVGQEFESEAEAHAFYNAYATSVGFIVRVSKLSRSRIDNSAIGQIFVCNKEGYRMTDKRENVIRQRVKTRVGCKAMIMVRKVKSGSWVVTRFVKEHTHLLAGPGGGRRDFIYEQYPGERYRIRELNQQLTYSREKEHIDEYNESLSKKIQHIVDNVKEMESKEEQSQLNFQLATL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1897 269 Coils Coil 236 256 - -
Amo16g1897 269 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 77 259 - -
Amo16g1897 269 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 77 259 - -
Amo16g1897 269 Pfam FAR1 DNA-binding domain 109 194 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1897 Amo-Chr16 51148575 51150286 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1897 FAR1 1.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1897 - - aip:107647603 336.265