Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1876 ATGCGCCCTGTCACCAAACCCGAAAAGAAGATCTGTGCTCTGCTCCAGGGACTGCTCCGGCGACGATCTTCTCAGTGGCGTTATCCTCCGACGAGATTGTGTGCTCTCTCCAGCGATGATCTCCTCTGGCAGGTTCTCCTCCGTCGGCGCATTCTCCTCCTGCTACAATCTCCGTGTGAGAGCAAGCGGCGATCTCCTCCGGCGGTGATCTCCTCCATCAACGCTTCTCCATCTCTATCGAGCTTCGTTGAGCATCTAGAAGAAATTGGAGGTCAGGCATTCACTAAATTTTCTTCTAATTTTGACGTGAAGCAGCTACAAGAGCAAGTGAAGGTTCTAGAAACTGAAAGCAAAAGGAAAAGTGCGGAGTCTGTTGTGTATGTTGAGAAATCTGAGTCAAATTCAGGGGATGGAAACTCGTACGGAGTCTCAAAAGCACTGAGTTGGTTGGTGCTACCTGAATTGGAGGCAAGAGTGTCTGAGAAGAATGTCCTCATTCAGATCCACTGCGAAAAACATAAAGGAGTGTTGATGCACATTCTCAAGCTCATTGACAAACTCTATCTCTCTGTTCTTAACACCACTTCCTTGACTTTTGGAACCTCCATTGTCAACATAACCATCACTTCCAAGATGGATGACAAGTTCAGCTTTAGCGTGAAGCAGCTTGCTAAAAACATAAGGGTGGGACTGTTGCAATTGATGTAG 708 0.4718 MRPVTKPEKKICALLQGLLRRRSSQWRYPPTRLCALSSDDLLWQVLLRRRILLLLQSPCESKRRSPPAVISSINASPSLSSFVEHLEEIGGQAFTKFSSNFDVKQLQEQVKVLETESKRKSAESVVYVEKSESNSGDGNSYGVSKALSWLVLPELEARVSEKNVLIQIHCEKHKGVLMHILKLIDKLYLSVLNTTSLTFGTSIVNITITSKMDDKFSFSVKQLAKNIRVGLLQLM* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1876 235 Coils Coil 103 123 - -
Amo16g1876 235 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 102 232 - -
Amo16g1876 235 PANTHER BHLH TRANSCRIPTION FACTOR 102 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1876 Amo-Chr16 48418247 48419414 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1876 103 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 38.776 9.67e-22 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1876 - - ahf:112748090 201.445