Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1865 ATGAAAATTGCTGATTTCGGACTGGCCAGGTCCTTTCAAGAAGATAAGAGTCACATTAGCACATCTATAGCCAGAACTCTGGGTTACATGGCTCCAGAGTACCTAGCTCATGGTCAGTTAACAGAAAAGACAGATGTATATAGTATTGGAGTGCATTTCCAATCAGGGACAACAGAAGAGCTATTTGATCCAAATCTAGTTTCAGATAACAATAATGTTAATAAGAAATATGAGATTTTAAGAGTGGTGCACATAGGACTTCTATGCACACAAGAGAACCCTTCCTTGAGGCCAACCATGTCAAGGGCACTACAGATGCTAACAAAGAAGGAAGAGAATCTTGCACGTCCCTCTAGAACAGAAATTTGA 369 0.4011 MKIADFGLARSFQEDKSHISTSIARTLGYMAPEYLAHGQLTEKTDVYSIGVHFQSGTTEELFDPNLVSDNNNVNKKYEILRVVHIGLLCTQENPSLRPTMSRALQMLTKKEENLARPSRTEI* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1865 122 Gene3D Transferase(Phosphotransferase) domain 1 1 119 - -
Amo16g1865 122 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 52 119 - -
Amo16g1865 122 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 51 - -
Amo16g1865 122 SUPERFAMILY Protein kinase-like (PK-like) 2 113 IPR011009 -
Amo16g1865 122 Pfam Protein kinase domain 1 110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1865 122 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1865 122 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 52 119 - -
Amo16g1865 122 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 2 2 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1865 Amo-Chr16 46802221 46802999 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1865 2 118 Receptor kinase-like Gene Family AT1G70520 57.432 2.61e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Amo16g1865 Pkinase 4e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1865 - - aip:107631343 202.216