Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1859 ATGTTGAAGAAAAATATTTTGAGCTTTCCTTCAATTGCTTTCTTTCTGTTGCAGCTCAAGCGGGTCATGGAATCAGATTCTGCGTTAACAGAGGATTTGATAGCTTATAACATCATTCCCTTAGATGCTGCATCTTCAACAAATGCTATTGTAGCTATGTCAATCTCAAGAGAAGTTGCAATAGCCTCCCGCCTTGGTGTTGAGGCCGCCATTGTTGTTGGAGGTCGGAATTTCTTCTGTGAGGATGCATGGGTAGCTGCAACAGGATTAGAAAGATGTACTACATACCAAATTGGGGAGCTGGTATCAAGAGAAGTCACTCCTATGGACATGACAGCATTGACATTTTTTGTGGTTTTCAATATATTGGAGCTTGAGAACATATCAAAGGCTTTGTGTGAAGAACAAGTTAGAACACTAGTTGACCAAACTGGAGCAATAAGCTAA 447 0.4049 MLKKNILSFPSIAFFLLQLKRVMESDSALTEDLIAYNIIPLDAASSTNAIVAMSISREVAIASRLGVEAAIVVGGRNFFCEDAWVAATGLERCTTYQIGELVSREVTPMDMTALTFFVVFNILELENISKALCEEQVRTLVDQTGAIS* 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1859 148 PANTHER URIDYLATE KINASE 46 99 - -
Amo16g1859 148 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 46 99 IPR011817 GO:0006221|GO:0009041
Amo16g1859 148 PANTHER ASPARTATE/GLUTAMATE/URIDYLATE KINASE FAMILY PROTEIN 100 148 IPR011817 GO:0006221|GO:0009041
Amo16g1859 148 PANTHER URIDYLATE KINASE 100 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1859 Amo-Chr16 46507827 46511484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1859 18 49 Cell Wall Biosynthesis AT3G07160 65.625 6.40e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1859 - - ahf:112748733 137.502