Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1836 ATGGAAATGAATTATGGAACGAGGAAGAACATTATTATTAATAATGGCGTATTCCTCGTTTTACTACTCTCATGTTTTCTACCACGTGTTCAATCTGCGGACCCGCAGCCAACTTCTGCTATGATACCATCATTTTACACGGAAGAAATTTACAAGGAAATTGAAGCTCTTGCCACAGTTTTAACGATAGATATCAAGAAAAACCTAGGCTACTGCATTAAGGATATAAAAAAAGATTGGCTGGAAGCGTTTGATTTCAAGGGCAAGTTAGATTTCGTCGATGGCTGTGTTAAGCAAAAAGGGGATTTCAGAGATCGGATGTGCACAGCAGCGGAAATAAGGTACTACTTCAGGAGTTTGTTGCAAGGGGGTTCAGATGGGAATTATGTGAAACCAAACAGGAATTGCAACTTGACTTCATGGGTTCCTGGTTGTGAACCTGGTTGGAGTTGTAGTGCTGATGAGCCTATTGATCTCAAGAAGGATAATAAGGAGGAAATTCCTTCTAGAGTTTCAAATTCCCAACCTTGTTGTGAGGGCTTCTTCTGCCCTGAAGGCTTGACTTGCATGATAACTTGCCCCCTTGGTTCGTATTGTCCAATTTCAACACTAGATGCACAAAATGGAGTATGTAACCCATATGGTTACAAGGTCCCTGCAGGGGACAAGAATCATAGTTGTGGTAGTGCTGATACTTGGAGTAGTGCTGTCAACAATACTAACATATTCTGTGAAGCAGGACATTATTGCCCAACTACAACCCAAAAGTCTGTGGCTTTGAGTACACTCCTAGTCTTCATTTATAACTGTTCTGATCAAGTTCTTGCGACCCGAGAAAGAAGGCAAGCGAAATCCAGAGAACGTGCAGCAAAGCATGTCCGAGAAACGGTGCAAGCACGTGAAAGGTGGAAGATGGCAAAAGATATTGCCAAGAAGCGTACAATGGAGTCGTTGAATCGCACCTTCTCGCGAAGGAAGTCACAGAAGATGTCAGATCTTCCAAATACCATGGCAAATGTAGAGAACAACAAGGAGCCTAGCAACCTCTCGAAGATGATGGATTCCATTGAGAATGATCCCAACAGTCAGGAAGGCTTCGACGTGCAGATTGGAGATAAGAATGTGAAGAAGCAGCAGATGACAAAGGGAAAGAATCTGCATACACATAGCCAGATTTTGAGGTATGCTTATGGCCAGATTGAGAAGGAGAAAGCTCAGCAAGAGAAGAACACTAACTTGACATTCTCAGGAGTGATATCGATGGCCACCGAACAAGGAGAGGAAGTGAGAAAAAGGCCTGTGATTGAGATAGCTTTCAAGGACATAACTCTCACTTTGAAAGGGAAGAACAAGCATCTTCTGAGGTGTGTGTCCGGCAAGTTCATGCCAGGTCGAATTTCAGCTGTCATGGGACCCTCAGGGGCTGGGAAAACCACATTCCTTTCGGCTTTGGTAGGAAAAGCCAGAGGGTGCAATATAACAGGTGAAATTCTTATTAATGGAAAAAATGATTCCATTCACTGTTATAAGAAAATCACAGGTTTTGTGCCACAAGATGATATTGTCCATGGAAACTTGACAGTGGAGGAAAATCTTCGTTTTAGTGCAAGATGCAGACTATCGGCGGACTTGCCGAAAGCAGATAAGGTTTTGATTGTTGAGAGGGTAATTGAGTCCTTGGGACTTCAGCCAGTGAGGGATTCTCTAGTCGGTACAGTAGAGAAGCGAGGCATATCCGGAGGACAGAGAAAACGTGTAAATGTTGGCCTGGAGATGGTGATGGAGCCTTCCTTGTTAATCTTAGATGAGCCTACAACTGGCCTTGACAGTGCATCTTCCAGTTTGCTACTTAAGGCTCTTCGACGCGAAGCTCTCGAAGGCGTTAACATTTGCATGGTGCTTCATCAACCAAGCTATACTTTGTTTAGAATGTTTGATGATATAGTGTTTCTAGCCAAAGGTGGCCTTACTGCATACCATGGCCCTGTGAAAAATGTAGAAGAATACTTTGCCAGTATTGGGATTCCTGTGCCGGACCGTGTGAATCCTCCAGACCATTTCATTGACATTCTAGAAGGTTTGGTGAAACCGAGTGCAACAGGTGTAACTCATGAACAACTTCCTGTCAGATGGATGCTTCACAATGGATATGCAGTGCCACCAGATATGCTTCATTTTGTTGATCAAATCGCAGCGGCTTCTGGTGGCGCAACTGTGGTTCCTACAAGTCAGTCAATAAAGGTTACTGAGAATGAGCAATCTTTTTTCTCCGAGTTTTGGGAGGATTTGAGGGATAATATTCAGAGCCAACTAGATCGCCTTGAGGCGATCTTTATGACGTCAAAGGACTTATCGAACCGGAGAACTCCTAGTATAGCCAGGCAGTACAGATATTTTATTGGCCGGGTCGGTAAGCAGCGGCTGAGAGAGGCTAAATTACAAGCTGTAGACTATCTCCTTTTACTAGTTGCTGGTGCTATCTTGGGAATGCTAACTAAAGTGAATGATAACTCATTTGGCTCCCTTGCTCTACTTTGCAAGATTGGTGCCCTAAGATCATTTTCTAATGACAAGTTAAATTACTGGAGGGAGAGCGCCTCTGGGATCAGTAGCCTGGCCCATTTTCTATCTAAAGACACAGTTGATCTTTTCAACACAATCATCAAACCGGTTGTTTTTCTATCCATGTTCTACTTTTTCAGCAATCCAAGGTCAAGCTTTGCAAGTAACTATGTAGTGTTGCTTTGTTTGGTGTACTGTGTGACTGGCATAGCTTATATATTCGCCATCTACTTCGCCTACAGTCTTGCACAGCTGTGGTCAGTGTTGCTTCCTGTGGTTATGACCCTCATTGCAAAACAAAACGACGATTCAATACTCATGCACATTATAATGAAAGTTTGCTACCCAAGATGGGCTTTGGAGGCCTTTGTCATTGCAAATGCTGAAAGGTACACTGGGGTGTGGCTAATAACACGTTGCACTTCACTGCTGGTGAGTAGGTATAATCTTGGGGACTGGGACTTTTGTCTGATTGCCCTTGTTGTTTATGGTATCGTTGCCAGAATTGTGGCCTTCTTTTGCCTTGTTATTTCCCAAAAGAGGTGA 3108 0.4344 MEMNYGTRKNIIINNGVFLVLLLSCFLPRVQSADPQPTSAMIPSFYTEEIYKEIEALATVLTIDIKKNLGYCIKDIKKDWLEAFDFKGKLDFVDGCVKQKGDFRDRMCTAAEIRYYFRSLLQGGSDGNYVKPNRNCNLTSWVPGCEPGWSCSADEPIDLKKDNKEEIPSRVSNSQPCCEGFFCPEGLTCMITCPLGSYCPISTLDAQNGVCNPYGYKVPAGDKNHSCGSADTWSSAVNNTNIFCEAGHYCPTTTQKSVALSTLLVFIYNCSDQVLATRERRQAKSRERAAKHVRETVQARERWKMAKDIAKKRTMESLNRTFSRRKSQKMSDLPNTMANVENNKEPSNLSKMMDSIENDPNSQEGFDVQIGDKNVKKQQMTKGKNLHTHSQILRYAYGQIEKEKAQQEKNTNLTFSGVISMATEQGEEVRKRPVIEIAFKDITLTLKGKNKHLLRCVSGKFMPGRISAVMGPSGAGKTTFLSALVGKARGCNITGEILINGKNDSIHCYKKITGFVPQDDIVHGNLTVEENLRFSARCRLSADLPKADKVLIVERVIESLGLQPVRDSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTTGLDSASSSLLLKALRREALEGVNICMVLHQPSYTLFRMFDDIVFLAKGGLTAYHGPVKNVEEYFASIGIPVPDRVNPPDHFIDILEGLVKPSATGVTHEQLPVRWMLHNGYAVPPDMLHFVDQIAAASGGATVVPTSQSIKVTENEQSFFSEFWEDLRDNIQSQLDRLEAIFMTSKDLSNRRTPSIARQYRYFIGRVGKQRLREAKLQAVDYLLLLVAGAILGMLTKVNDNSFGSLALLCKIGALRSFSNDKLNYWRESASGISSLAHFLSKDTVDLFNTIIKPVVFLSMFYFFSNPRSSFASNYVVLLCLVYCVTGIAYIFAIYFAYSLAQLWSVLLPVVMTLIAKQNDDSILMHIIMKVCYPRWALEAFVIANAERYTGVWLITRCTSLLVSRYNLGDWDFCLIALVVYGIVARIVAFFCLVISQKR* 1036
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1836 1035 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 437 678 IPR003439 GO:0005524
Amo16g1836 1035 MobiDBLite consensus disorder prediction 328 347 - -
Amo16g1836 1035 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 437 660 IPR027417 -
Amo16g1836 1035 Pfam ABC-2 type transporter 635 1034 IPR043926 GO:0140359
Amo16g1836 1035 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 39 1030 - -
Amo16g1836 1035 Gene3D - 424 673 IPR027417 -
Amo16g1836 1035 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 39 1030 - -
Amo16g1836 1035 MobiDBLite consensus disorder prediction 320 347 - -
Amo16g1836 1035 CDD ABCG_EPDR 435 661 - -
Amo16g1836 1035 SMART AAA_5 463 655 IPR003593 -
Amo16g1836 1035 Pfam ABC transporter 456 605 IPR003439 GO:0005524
Amo16g1836 1035 ProSitePatterns ABC transporters family signature. 578 592 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1836 Amo-Chr16 44513690 44521338 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1836 464 657 Calmodulin-binding Proteins AT2G36910 29.208 6.61e-11 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1836 - - gmx:100812387 1494.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1836 16 44513690 44521338 Amo16g1836 16 44513690 44521338 ECH