Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1835 ATGCCACGGAGCTGTGTAATTGAAGCTGAATCAACCAAATCAGTGGTTGAACTTGGAGACTTCTCACTTAATGATCAGTCCGTCAAAGAACTCATCCCAACTGTTGATTACACTCGTCTCATAGAGGAGCTGCCTCTGTTACTAGCACAAGTGACAAAGATACATGGTGGTGAGGCCATCGCCATAGGAATCGCTTGGTCTCATCCATTGGGTGATGGGTCTGCAGCCTTTCATTTCGTCAACTCATGGGCAAAGCTCACCAAAGGATGCACAATGGATGTAAGTGAATTGCCGTTTTTTAACCGCATGGTCCTCAAACCATCCTCACATCTGCCGTCATCGCGACACTTTGATCACCCAAAGTTGAAGCCTTTTCCACTTATCCTCAGAAGAATCGACAACATTGAAGAGCAAAAGAATAAAACGACCTTTGCATAG 438 0.4521 MPRSCVIEAESTKSVVELGDFSLNDQSVKELIPTVDYTRLIEELPLLLAQVTKIHGGEAIAIGIAWSHPLGDGSAAFHFVNSWAKLTKGCTMDVSELPFFNRMVLKPSSHLPSSRHFDHPKLKPFPLILRRIDNIEEQKNKTTFA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1835 145 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 6 143 - -
Amo16g1835 145 PANTHER SHIKIMATE/QUINATE HYDROXYCINNAMOYLTRANSFERASE 6 143 - -
Amo16g1835 145 Pfam Transferase family 7 141 - -
Amo16g1835 145 Gene3D - 3 124 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1835 Amo-Chr16 44457798 44458609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1835 7 143 Monolignol Biosynthesis Gene Families AT5G48930 29.197 2.62e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1835 K13065 - gmx:100779814 139.428