Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1834 ATGCAGATCCAGAAATTGACGAAGAATGTCAATGGCAGTGCTGATAATGGTGATTCTCATCAATCTCAGAGAAAATACAGTAGATTTGAAGTTATTGATGTCCATATAGATTTCATAGCAAAGCAAGAGAGGTGGGATTTGATTAGGACACCTTATTTGGAGAGAGGAGAGTGTATGGCAGACGTGCCTTTCTTTGAGAACCCTAACGTTATACTTGGAAGCTGGATGGGATTGTCAGTGTATGAAGCTGATTTTGGGTGGGAAAAGCCCTTTCATTTTGGTCCGGGTGGTGTGTGTCCTTATGACAGGGGGGTTATTTCTCCAAGGCATGGCGATGACGATGTTGATGTGTTCATGCATTTTCAGGTGGCACATATTCAAGATTTCATCATCATGTTCTGGGAAGATATAGGAAATGCTAGTTGCAGGACAATAGAAGCCAATATTTAA 450 0.4133 MQIQKLTKNVNGSADNGDSHQSQRKYSRFEVIDVHIDFIAKQERWDLIRTPYLERGECMADVPFFENPNVILGSWMGLSVYEADFGWEKPFHFGPGGVCPYDRGVISPRHGDDDVDVFMHFQVAHIQDFIIMFWEDIGNASCRTIEANI* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1834 149 Gene3D - 32 135 IPR023213 -
Amo16g1834 149 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 31 137 - -
Amo16g1834 149 MobiDBLite consensus disorder prediction 1 22 - -
Amo16g1834 149 MobiDBLite consensus disorder prediction 1 20 - -
Amo16g1834 149 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 31 137 - -
Amo16g1834 149 Pfam Transferase family 58 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1834 Amo-Chr16 44457070 44457782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1834 65 135 Monolignol Biosynthesis Gene Families AT5G48930 34.247 3.93e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1834 K13065 - aip:107646786 248.44