Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1819 ATGGCATCCAGTAGCAGGGGTCAAGGCGGAATTCAACAGCTGTTGGCTGCTGAACAAGAAGCACAGCAGATTGTGAATGCTGCAAAGAATGAAAAACTGGCTAGGCTGAAACAGGCCAAAGATGAGGCTGAAAAGGAGATTGCTGAACATCGAGCTCAGCTTGAGTACCAGTTTCAGAAGAAAGTTTCAGAGAGTAGCGGAGATTCTGGTGCTAATGTCAAGCGACTTGAGCAAGAAACTGAGTCAAAGATCCATCTCCTGAAATCCGAGTCTTCAAGAATATCAGGGGATGTTGTCAGCATGCTCCTCAGTTATGTAACAACCGTGAAAAATTAG 336 0.4524 MASSSRGQGGIQQLLAAEQEAQQIVNAAKNEKLARLKQAKDEAEKEIAEHRAQLEYQFQKKVSESSGDSGANVKRLEQETESKIHLLKSESSRISGDVVSMLLSYVTTVKN* 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1819 111 Pfam Vacuolar (H+)-ATPase G subunit 8 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo16g1819 111 Coils Coil 11 60 - -
Amo16g1819 111 TIGRFAM V_ATP_synt_G: V-type ATPase, G subunit 5 110 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo16g1819 111 Gene3D - 2 111 - -
Amo16g1819 111 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT G 4 111 IPR005124 GO:0016471|GO:0046961|GO:1902600
Amo16g1819 111 PANTHER V-TYPE PROTON ATPASE SUBUNIT G1 4 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1819 Amo-Chr16 41618764 41621127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1819 9 111 Primary Pumps ATPases(2) AT4G23710 67.961 4.33e-45 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1819 K02152 - gmx:100305477 177.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1819 16 41618764 41621127 Amo16g1819 16 41618764 41621127 ECH