Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1775 ATGTATATAAAATGGTTCTTTGGTGATTTTGGCGGTTTTAAACCGCCATTATTCGAAACCCATCATTTAAAAAAAAGCCCAAATAAAACCCTTCCCCAACAAAGGAAAACCCTAACCCGAAAACCCATTACTGCTGAAATTAACGCGCCCTGCCACCAAACCCGAAACAAAGATCTGTGCTCTGCTCTAGCGACGGCTCCAGCGACGATCTTCTCAGTGGCATTATCCTCCGACGAGATTGTGTGCTCTCTCCAGCGACGATATCTTCTGGCAGGTTTTTTTCCGGCGATGCGTTCTCCTCCGGCTACAATTTCTGTCATCGAGTTGTGTTCTGCGACTTCTCCATCTCCATCTCCATCGAGCTTCATTGATCATCTAGGTTTTCGATTTTCTTCCTTGTCAGAAGAAATTGAAGAGCAAGTGAAGGTTCTAGAAACTGAAAGCAAAAGGAAAAGCGTGGAGTCTGTTGTGTATGTTGAGAAATCTGAGGTGTGCGGAGAGGAAGATGTGTCAAACACTTGGTCAAATTCAAGGGATGAAAACTTGTACGAAGTCTCAAAAGCACTGAGTAGGTTGGTGTTGCCTGAAGTGGAGGCAAGTGTGATTGAGAAGAACGTCCTCATTCGGATCCACTGCGAGAAACACATAGGAGTGTTGATGCACATTCTCAAGCTCATTGACAAACTCCATCTCTCTGTTCTTAGCACCACTTCCTTGCCTTTTGGACCCTCCATCATCATTTCTTTTATCAACTGCTATATGATCATGAAAGCATTATATCAGTGTGTGCATTCTCTGAATGGTTACATCATGCTTGAAAAAGAGAAAAGAGAAAATAAGGGGTGGGTTTTCCGAGTTCTGTCCAGGCATGTAAACTTCAGGTTGAGCGGGGAGCTTCTTGACAGAATTTTGTCAAGGGGAGGAAAGTATCTGGAGGAGGATGCCAAAGCTATAGTTTTGCAGATTCTAAGCGTAGCTGCTTTTTGTCATGTAATGGTGATGGTGATTAAGGTTGTTGTAACCATTTGGTATCGTGCTCCTGAGTTGCTTCTTGGAGCAAAACATTATACTAGTGTTGTTGATATATATGATCCTCGAAAGCGTATTACAGTAGCACAAGCTTTGGAACATGAGTAA 1137 0.4301 MYIKWFFGDFGGFKPPLFETHHLKKSPNKTLPQQRKTLTRKPITAEINAPCHQTRNKDLCSALATAPATIFSVALSSDEIVCSLQRRYLLAGFFPAMRSPPATISVIELCSATSPSPSPSSFIDHLGFRFSSLSEEIEEQVKVLETESKRKSVESVVYVEKSEVCGEEDVSNTWSNSRDENLYEVSKALSRLVLPEVEASVIEKNVLIRIHCEKHIGVLMHILKLIDKLHLSVLSTTSLPFGPSIIISFINCYMIMKALYQCVHSLNGYIMLEKEKRENKGWVFRVLSRHVNFRLSGELLDRILSRGGKYLEEDAKAIVLQILSVAAFCHVMVMVIKVVVTIWYRAPELLLGAKHYTSVVDIYDPRKRITVAQALEHE* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1775 378 Gene3D Transferase(Phosphotransferase) domain 1 328 363 - -
Amo16g1775 378 PANTHER BASIC HELIX LOOP HELIX (BHLH) DNA-BINDING FAMILY PROTEIN 136 244 - -
Amo16g1775 378 SUPERFAMILY Protein kinase-like (PK-like) 297 377 IPR011009 -
Amo16g1775 378 Coils Coil 134 154 - -
Amo16g1775 378 PANTHER BHLH TRANSCRIPTION FACTOR 136 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1775 Amo-Chr16 37930238 37933225 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1775 44 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 26.316 1.20e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1775 - - ahf:112748090 155.221