Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1769 ATGGATATTGATGAAGCTGAGAGAGTAGTTGTGGCAAAACCAGTTGCTTCAAGGCCTAATTGTTCTACTTTCAGATCTTTCTCTGAGCTTCTTGCAGGTGCCATTAATGCCTCATCACCCCAAATTGAATCTTCCCAGGCAACAGTTTCTGCCATTAGACCAAAGACAGTGAGGTTCAAGCCGGCACTGAACCGCACCCCCGCTGCGTCTGTTGCTTCTCAGGATGACATTTTTGGAGCTGCACTTTGTGATTCTTCCCACAAGAGTCCTAATTCTGACACCAAGCAGTCTCTCATATACAAACCAATGGCAAAACTTGTGTCAAGGACAACAGTTTCTCTTTTGGCAAATATGGGAAATTGCAGTACAATTCAGCAACAATCCGGGCAATCAATGGAGGGTGGTCTTCATCATATCAGCCATGAAAGTTTCGGAACTAATCTGAGCTCTGATCTTTATCACAGTCACAGCATTACACCACCTTCTGAAACTACTGAACCTTGTAAGATGATGCAACAGAACATAGAGGAGGATCAGAAGGCTTTAACATCCGCAATCAATTGCGATCGACCTTCTTATGATGGGTATAACTGGAGGAAATACGGGCAGAAGCAAGTGAAAGGAAGTGAGTATCCGCGGAGTTATTATAAGTGCACTCATCCTAATTGTCCAGTGAAGAAGAAGGTTGAGAGATCATTTGATGGACAGATTGCAGAAATTGTTTATAAAGGTGAACACAACCATCCAAAGCCACAGCCTCCCAAGCGCAGCGGAACAGCAGGGATGCAAGGATCAGGAATGGTGCCTGATGGAGTGGCTCAAGATGTGTGGAGTAACAATCACAGTGAGAGGAATGATAGCAGAATAGAAAACCAGAATGACACAGGGCTGCCTGCGAATTCGGTTTATGGGGTTAAAGTTTCACAGCCTAATGATTCTATTTTAAATGCATATGGGGTAAGCCCGGAAAATTCGTGTGGTCTAAGTGGGGAATGTGAGCAAGGAAGCAAAGGATTTGAGGCAGAGGAGGAAGAATCTAGAAGTAAAAGAAGGAGGAATGAGAGTCGATCCAATGAAGCAGCCGTGTCGGAGGAAGCATTAATCGAGCCACGCATTGTGCTGCAGAGTTCTACAGATTCAGAGATAATTGGAGATGGCTTCCGCTGGAGGAAGTACGGGCAGAAGGTGGTGAAGGGCAATCCATATCCCAGAAGTTACTACAGATGTACAAATGTGAAGTGTAATGTTCGAAAGCACGTGGAGAGAGCAATAGATGATCCAAGAGCATTTGTCACTACATATGAGGGAAAGCACAATCACGAGATGCCAATCAAGAACATCAACCCAAATGTCCCCTCTGAGAGAGATTCACAAGCTTCTCTTAGTAAAGACAAACCATGA 1401 0.4454 MDIDEAERVVVAKPVASRPNCSTFRSFSELLAGAINASSPQIESSQATVSAIRPKTVRFKPALNRTPAASVASQDDIFGAALCDSSHKSPNSDTKQSLIYKPMAKLVSRTTVSLLANMGNCSTIQQQSGQSMEGGLHHISHESFGTNLSSDLYHSHSITPPSETTEPCKMMQQNIEEDQKALTSAINCDRPSYDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSFDGQIAEIVYKGEHNHPKPQPPKRSGTAGMQGSGMVPDGVAQDVWSNNHSERNDSRIENQNDTGLPANSVYGVKVSQPNDSILNAYGVSPENSCGLSGECEQGSKGFEAEEEESRSKRRRNESRSNEAAVSEEALIEPRIVLQSSTDSEIIGDGFRWRKYGQKVVKGNPYPRSYYRCTNVKCNVRKHVERAIDDPRAFVTTYEGKHNHEMPIKNINPNVPSERDSQASLSKDKP* 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1769 466 Pfam WRKY DNA -binding domain 194 249 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 Pfam WRKY DNA -binding domain 385 441 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 SUPERFAMILY WRKY DNA-binding domain 191 251 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 ProSiteProfiles WRKY domain profile. 378 443 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 336 455 IPR044810 GO:0003700
Amo16g1769 466 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 262 IPR044810 GO:0003700
Amo16g1769 466 MobiDBLite consensus disorder prediction 336 359 - -
Amo16g1769 466 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 336 455 - -
Amo16g1769 466 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 38 262 - -
Amo16g1769 466 MobiDBLite consensus disorder prediction 243 304 - -
Amo16g1769 466 ProSiteProfiles WRKY domain profile. 194 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 MobiDBLite consensus disorder prediction 440 466 - -
Amo16g1769 466 SUPERFAMILY WRKY DNA-binding domain 378 443 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 SMART WRKY_cls 383 442 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 SMART WRKY_cls 192 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 MobiDBLite consensus disorder prediction 326 363 - -
Amo16g1769 466 Gene3D WRKY domain 178 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
Amo16g1769 466 Gene3D WRKY domain 369 444 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1769 Amo-Chr16 37302181 37307904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1769 91 444 WRKY Transcription Factor Family AT2G37260 43.236 1.02e-84 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Amo16g1769 WRKY 5.2e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1769 - - gmx:100794069 681.789