Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1737 ATGAATCAAGTGGACGAGACCAGATGTATTGTGGATGAACAATTTATCCCAAAGGTCAGGATGATTTTTAAGACACTAGAAGAAGCCGAAAAGTTCTATAAAAATTATTCCAAACTTGCCGGTTTTTCTACCAAAATAAGGAACACGACTCAGAAGGGAGACGAGATTAAGAATCAACTAATCGTATGCAGCAGAGAGGGGAGGTGGAAATCTAAGATATCTCCAACTCTTAAGACAAATCCCTCAGCCGGAATAAACTGTCCAGCCAGGATCTACGTACACATATTGAAGGACGTCAGTCTTTGGATAATTTCCAAAGTTGTTCTAAATCACTCACACCCCTGCTGTCCAGACCGGGCAGAGATGCTCAAACGATACAGGGAGCTAAGCATAGTTGTACGAGGATCGGCATATATGGATTTCAGTTTACCTGGATCACCACTTTTGGGCCAAGATGAGAAGCACACAAAGGAGCGAGAGCATGCATGCATTTTTCAACAAGTTCATCACACGCAACAGCTCCTTAAATTTTCACACCGTGATACCGTGCGCAACAAAATCAGCAATAGAGGCCCAGTTTCAGCACGTGTATACCCACAAGAAGTTCAACGAAGTTCAAGGACAATTCAGAAGAAAGGTGAACTGCATCACAAGATCAATGCATTCCACCTAGGTTTCACAACATACGAAGTCATAGAGCAGGTTTCCAACTCCACATTCAACAAGTTTTTCGTCACCTACGATGCACTGTTCGAGTTAAGGGGCATACTGTGCCACCATTCCCTGAGCATCCTAAACTTCGAGCGAGTAGATAACATGGCACCGAAATACATACTGGAGAACTGGAGCAAGAACATAAAGAGAAGGTACACACACATCAAGAGCAGCCAAGACGAGCCTCTACTGGAGCCGAGAAGCAAGAGATTCGACGATTTGGTGTTTCGGTCGCATAATATATGCGAATTTGCATCAGAACTGGGATCAAACCTGGAAAAAAAGATCTCAAACACCACGAAGAAAAAGAAAAAGCCATCTCCAAGCGAGTTAAACCCTTTAGACAGCGGATCAATGATTCAGTCAAGCTCCAGCTTTTACAATGCACCGGATATGAATTATCCCGGAGAGGATTATAGGAGTTTCATTTGTGCAACAGAATATTTGGACCATATTCAAGCTTGA 1179 0.43 MNQVDETRCIVDEQFIPKVRMIFKTLEEAEKFYKNYSKLAGFSTKIRNTTQKGDEIKNQLIVCSREGRWKSKISPTLKTNPSAGINCPARIYVHILKDVSLWIISKVVLNHSHPCCPDRAEMLKRYRELSIVVRGSAYMDFSLPGSPLLGQDEKHTKEREHACIFQQVHHTQQLLKFSHRDTVRNKISNRGPVSARVYPQEVQRSSRTIQKKGELHHKINAFHLGFTTYEVIEQVSNSTFNKFFVTYDALFELRGILCHHSLSILNFERVDNMAPKYILENWSKNIKRRYTHIKSSQDEPLLEPRSKRFDDLVFRSHNICEFASELGSNLEKKISNTTKKKKKPSPSELNPLDSGSMIQSSSSFYNAPDMNYPGEDYRSFICATEYLDHIQA* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1737 392 MobiDBLite consensus disorder prediction 336 356 - -
Amo16g1737 392 Pfam FAR1 DNA-binding domain 31 116 IPR004330 -
Amo16g1737 392 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 148 IPR031052 GO:0006355
Amo16g1737 392 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 231 342 IPR031052 GO:0006355
Amo16g1737 392 PANTHER OS03G0843700 PROTEIN 1 148 - -
Amo16g1737 392 PANTHER OS03G0843700 PROTEIN 231 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1737 Amo-Chr16 35873058 35888989 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1737 FAR1 1.8e-11 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1737 - - aip:107646405 231.106