Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1730 ATGGCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTTCTGCAGAAGCTGATGCTCCAAAACTGAGAAACAATCAACCTGCCCCAGGAGCTGTCAACCCTCCTACTATAATGGGACGTGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAACGTGACCTGAAGAGACAGAAAAGAAAACAGTCTAACAGAGAATCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGCGAGGACTTGCAAAAGAAGGTGGAACTGGGAAACGAGAGCCAGACTCTGAGAGAAGAACTTCAGAGAGTATCAGAAGAATGCGAGAAGCTTACAGCTGAAAATAATTCCATCAAGATTATGTCCTCTAACAATACTTTTGCTGTCAACAGTCAACAGGAAAAGTTGGAAAGGTTATGTGGACCAGAAGCAGTTGCCAGCCTCGAATAA 453 0.4437 MAATNLNIGMDLWNASSAEADAPKLRNNQPAPGAVNPPTIMGREVALGEQWIQDERDLKRQKRKQSNRESARRSRLRKQAECEDLQKKVELGNESQTLREELQRVSEECEKLTAENNSIKIMSSNNTFAVNSQQEKLERLCGPEAVASLE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1730 150 CDD bZIP_plant_GBF1 60 109 IPR045314 GO:0003700|GO:0006355
Amo16g1730 150 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 62 77 IPR004827 GO:0003700|GO:0006355
Amo16g1730 150 SUPERFAMILY Leucine zipper domain 58 113 IPR046347 GO:0003700|GO:0006355
Amo16g1730 150 Coils Coil 68 122 - -
Amo16g1730 150 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 150 IPR044827 GO:0003700|GO:0006355|GO:0043565
Amo16g1730 150 MobiDBLite consensus disorder prediction 56 80 - -
Amo16g1730 150 Gene3D - 58 126 - -
Amo16g1730 150 PANTHER G-BOX-BINDING FACTOR 1-LIKE ISOFORM X1 1 150 - -
Amo16g1730 150 SMART brlzneu 55 118 IPR004827 GO:0003700|GO:0006355
Amo16g1730 150 Pfam bZIP transcription factor 55 116 IPR004827 GO:0003700|GO:0006355
Amo16g1730 150 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 57 119 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1730 Amo-Chr16 35603861 35604784 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1730 3 150 bZIP Transcription Factor Family AT4G36730 51.007 5.40e-37 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo16g1730 bZIP_1 1.4e-16 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1730 K09060 - gmx:547788 203.371