Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1723 ATGGCAACAATAGCTGTGCAAGAAATTCGACCTCCCACTCTGTCTGCAACCTCAGACCCACCACCTATCTTTGATGGAACTACCAGGTTGTACATCAGTTATTCATGCCCTTTTGCGCAGCGTGTATGGATCACTAGGAACTACAAGGGATTACAAGAAAAGATCAAATTAGTTCCTATTGACCTTCAGAACAAGCCTGCTTGGTATAAAGAGAAGGTCCACCCAGAAGGCAAGGTGCCATCTCTTGAACATGACGGCAAGATTTTGGTAGAGAGTATTGACTTGATCAAATACATAGATGTCAATTTCGAAGGACCATCTCTATATCCTAATGATCCTACCAAGAAGGAATTTGGTGACCAGCTAATTAAGTATGTCGATATTTTTACCAAAGAGATGTTTGGATCATTCAAAGGCGACCCTGTAACGCAAACAAGTGCTACATATGACTACCTGGAGAATGCTCTTGGTAAATATGAAGATGGCCCATTTTTCCTTGGTGAATTTAGCTTGGTGGACATTGCCTATATCACATTTGTTGAGAGGTTCCAACTTGTGTCATCAGAGATTTACAAGCATGACATCACTGCTGGAAGGCCTAAACTAGCTACATGGATTGAGGAGGTAAACAAGAATAACGCATATAAGCAGACGAAACCTGAAAATCCACAAGAGTTCGTTGACTTTGTCAAGAAGCGTTTCTTGGGTCAGTAG 714 0.416 MATIAVQEIRPPTLSATSDPPPIFDGTTRLYISYSCPFAQRVWITRNYKGLQEKIKLVPIDLQNKPAWYKEKVHPEGKVPSLEHDGKILVESIDLIKYIDVNFEGPSLYPNDPTKKEFGDQLIKYVDIFTKEMFGSFKGDPVTQTSATYDYLENALGKYEDGPFFLGEFSLVDIAYITFVERFQLVSSEIYKHDITAGRPKLATWIEEVNKNNAYKQTKPENPQEFVDFVKKRFLGQ* 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1723 237 Gene3D Glutaredoxin 1 104 - -
Amo16g1723 237 Gene3D - 105 237 - -
Amo16g1723 237 SUPERFAMILY Thioredoxin-like 20 107 IPR036249 -
Amo16g1723 237 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 26 107 IPR004045 -
Amo16g1723 237 Pfam Glutathione S-transferase, C-terminal domain 143 207 - -
Amo16g1723 237 PANTHER GLUTATHIONE S-TRANSFERASE TAU 1 237 - -
Amo16g1723 237 SFLD Main (cytGST) 29 211 - -
Amo16g1723 237 SUPERFAMILY GST C-terminal domain-like 103 234 IPR036282 -
Amo16g1723 237 PANTHER GLUTATHIONE S-TRANSFERASE L1 1 237 IPR044629 GO:0004364
Amo16g1723 237 Pfam Glutathione S-transferase, N-terminal domain 30 106 IPR004045 -
Amo16g1723 237 SFLD Glutathione Transferase (cytosolic) 29 211 IPR040079 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1723 Amo-Chr16 34642955 34645589 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1723 8 235 Glutathione S-transferase Gene Family AT5G02790 67.982 5.84e-115 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1723 K00799 - gmx:100793025 367.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo19g3760 19 153173703 153175958 Amo16g1723 16 34642955 34645589 ECH
Amo16g1723 16 34642955 34645589 Amo16g1723 16 34642955 34645589 ECH
Amo16g1723 16 34642955 34645589 Amo06g1086 06 16712230 16714796 hybridization
Amo16g1723 16 34642955 34645589 Amo12g2727 12 112779966 112783260 PCT
Amo12g2727 12 112779966 112783260 Amo16g1723 16 34642955 34645589 PCT