Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1715 ATGGTTAGATCGTGTTGGAAACCAAGTGGAGATGGTGGTGATGACGATGTGAGAGGAAAAGTTGAAGGGTTGCTATGGTACAAGGATTTGGGGCACCATCTTTACGGTGAATTCTCAATGGCTGTCATCCAAGCCAATAGTTCAATAGAGGATCGAAGCCAACTTGAATCTGGACCTTTAAGTTCTGATTATATGGGTCCTCAAGGAACCTTTGTTGGTATATATGATGGTCATGGTGGTGCTGAGGCTTCACAATTTGTCAGTGACAATCTTTTCAGCAATCTCAAAAGATTTGCAGCAGAACATCAAGGAATTTCAGAAAACATTATCAAAAGGGCTTTTACTGAAACTGATGAGAGTTTTCTGTCTGTTGTGAAGAAACAGTGGCTAAGCAAGCCACAAATTGCTTCCGCGGGTTCATGTTGTTTGACAGGGATCATCTGCAACGGCATGATGTATATTGCGAACGCCGGAGACTCGAGGGCGGTGTTAGGAAGATTAGAGAGGGCAACAAGAGAGACATATGCTGTTCAAGTATCTGCAGAACACAACGTTAACATAGAGACAGAGAGAGATGAAGTTAGGTCAAGGCATCCTTATGATTCACAAATTGTGGTCATGAAACACAATGTTTGGCGTGTGAAAGGCCTAATACAGGTTTCAAGGTCTTTAGGTGATGCATATCTCAAGAAAGCAGAATTCAACAGGGAGCCTCTACCACAGAAGTTTAGGTTGCCTGAACCTTTCTTCAAGCCCATCCTTAGTTGCGAGCCATCGATATCAACACATAAACTCCATCATGATGATCAGTTTCTGATCGTTGCTTCTGATGGTCTATGGGAGCAGCTTAGCAACCAAGAAGCCGTCAACATTGTCAGCAGCAACCCACGTAATGGGATTGCTAGGAAGCTTGTAAAGGCTGCATTGCGCGAAGCAGCTAAGAAGAGAGAGATGAGATTCTCAGACCTACAAAAGATTGAAAAGGGGGTGAGGAGACACTTCCATGATGACATATCAGTGATTGTTGTGTTCCTTAATCCAAAACTCATTGACAATACCTCTCTCTGGGGTTCTCCTCTTTCAATCAAAGGCGGCGGGCCTGCCATTTCTTAG 1113 0.4376 MVRSCWKPSGDGGDDDVRGKVEGLLWYKDLGHHLYGEFSMAVIQANSSIEDRSQLESGPLSSDYMGPQGTFVGIYDGHGGAEASQFVSDNLFSNLKRFAAEHQGISENIIKRAFTETDESFLSVVKKQWLSKPQIASAGSCCLTGIICNGMMYIANAGDSRAVLGRLERATRETYAVQVSAEHNVNIETERDEVRSRHPYDSQIVVMKHNVWRVKGLIQVSRSLGDAYLKKAEFNREPLPQKFRLPEPFFKPILSCEPSISTHKLHHDDQFLIVASDGLWEQLSNQEAVNIVSSNPRNGIARKLVKAALREAAKKREMRFSDLQKIEKGVRRHFHDDISVIVVFLNPKLIDNTSLWGSPLSIKGGGPAIS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1715 370 Gene3D - 28 354 IPR036457 -
Amo16g1715 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Amo16g1715 370 SMART PP2C_4 29 343 IPR001932 -
Amo16g1715 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 368 - -
Amo16g1715 370 Pfam Protein phosphatase 2C 69 314 IPR001932 -
Amo16g1715 370 CDD PP2Cc 35 345 IPR001932 -
Amo16g1715 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Amo16g1715 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
Amo16g1715 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1715 Amo-Chr16 34491009 34494149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1715 1 366 PP2C-type Phosphatase Gene Family AT3G12620 65.041 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1715 K01102 - gmx:100819870 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1715 16 34491009 34494149 Amo16g1715 16 34491009 34494149 ECH
Amo16g1715 16 34491009 34494149 Amo06g1067 06 16086286 16089108 hybridization