Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1668 ATGCAGACCAGATGTGTTGTGGATGAAAAATTTGTCCCAAAGGTGGGAATGATTTTCAAGACACTAGAAGAAGTTGGAAAGTTCTACAAACATTATTCGAAACTTGCCGATTTTTCTACCAAAATAAGGAACACGACTAGGGATGGAGACAAGATTAAGAATCAACTAATTGTATGCACCAAAGAGGGGAGGTGGAAATCCAAGATATCTCCAACTTTGAAGACAAATCCTTCAGCCGGGTTGAACTGTCCAGCCAGGATTTACGTACACATAATGAAGGATGTTGGTCTTTGGACAATTTCCAGAATTGGGCAGAGATGCTCAAACAACACAAGGAGCTTAGCATGTTTGTGCATCGCACCATCAAAACCAACGAGGAAGCTGGAATTAGACTGA 396 0.4116 MQTRCVVDEKFVPKVGMIFKTLEEVGKFYKHYSKLADFSTKIRNTTRDGDKIKNQLIVCTKEGRWKSKISPTLKTNPSAGLNCPARIYVHIMKDVGLWTISRIGQRCSNNTRSLACLCIAPSKPTRKLELD* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1668 131 Pfam FAR1 DNA-binding domain 27 103 IPR004330 -
Amo16g1668 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 7 103 - -
Amo16g1668 131 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 7 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1668 Amo-Chr16 32455584 32456013 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1668 FAR1 3.9e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1668 - - aip:107636756 195.282