Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1658 ATGGTTACAGACGGAAAATCCCAGCCCTCATCCCTCGAACTCTTCTCCTCCGGTAGAAGGTGCTGTCGCCGCCGGCGGGGACAGACCGTGGGTGCCCTCGTCATCTGGGGAAGCTCTACTCGGCCCTCTTCGCATCGTTCCTCCTCTTCTCGCGTCGCACGAAGTTCTGAGTTGAGCTCGTGGTGTCGCCGTCGCGAAGGGTTCCTCCCCTCCTCGCCGTCCATTGTTTCTGATTCTCTGCTCCTCGCCGTTGCTGCGTGTATTGGCTTTGATGTTGGAGAAGGTGGCACCCAACTTTCTGGAGGACAGAAGCAGAGAATTGCTATAGCTGATTGGGAATTCAATCTCAAGCTGCACACTGCTGGGATCATTGCTGCCAGTTTCGGATTGGCGAATCTTTTCTCCAGGCCCGATGGAGGGTTCATATCTGATGCAGTTTCAAAGAGGTTTGGAATGAGGGGTAGGCTCTGGGCCTTGTGGCTTTGCCAAACATTCGCTGGTGTCCTCTGCATAATTCTTGGGCTTGTTAGATCTTTGAGTGTTTATGTTGTTGTTATGATCATATTCTCTGTGTTTGTTCAAGCTACTTGTGGCATGACCTTTGGAATTGTTCCTTTTGTCTCAAGACGTGCACTATGTTGGGACTTTGGAAGATGGAACCATGTACTACTATTTCAGCACATGAATGATCTGGTCTTAGAGAATATTTGTGACCGTGTGAGGAAAGCTGGGATGATGAAGAAGAAGCAGCAGTAG 756 0.5026 MVTDGKSQPSSLELFSSGRRCCRRRRGQTVGALVIWGSSTRPSSHRSSSSRVARSSELSSWCRRREGFLPSSPSIVSDSLLLAVAACIGFDVGEGGTQLSGGQKQRIAIADWEFNLKLHTAGIIAASFGLANLFSRPDGGFISDAVSKRFGMRGRLWALWLCQTFAGVLCIILGLVRSLSVYVVVMIIFSVFVQATCGMTFGIVPFVSRRALCWDFGRWNHVLLFQHMNDLVLENICDRVRKAGMMKKKQQ* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1658 251 Gene3D - 92 109 IPR027417 -
Amo16g1658 251 Gene3D MFS general substrate transporter like domains 110 213 IPR036259 -
Amo16g1658 251 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 113 212 IPR044772 GO:0015112
Amo16g1658 251 SUPERFAMILY MFS general substrate transporter 114 207 IPR036259 -
Amo16g1658 251 PANTHER HIGH AFFINITY NITRATE TRANSPORTER-RELATED 113 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1658 Amo-Chr16 32203420 32207151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1658 114 212 Inorganic Solute Cotransporters AT1G12940 68.687 9.32e-41 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1658 K02575 K22191 ahf:112727541 185.267