Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1655 CAACGGCGCCAACTTCCTCCATCCAACCATCCAAGTGGCGCTCCCTTCTCAAGTGAAGTCAAGGCTCCTGATTCTTCACACTTTCTCCCTGTTGGTGGCTACGGTGCATGGTTCTCTCTTCCTAACATCAATGACACCAACCTCCTCCATCCGGCCATCCAAAAGGTCGCGGTGCAAGGCTTCCGGAAGAGAGCATCGTCCATGGAGTTTTCAACCCCGGAAGGCGGATTGATTAGCACATTGATCAATTCAACCCAAGGCGATGAAGAATTGAGTATGGGTGAAGTAGTTATTCAAGAGCAAGAGGGGTCTAAGGTCAACAAAATTACCGACGTCATTGTGACTAGAAAGGATGAGTTGGACTTTAGACATGAGTTGCCGGATCATAGTGGGGTCAGTGAAGAGGAAATCCCAGTCATAGGAATGAGTTTTGGTTCGTTGCCTCTGGCACAGAAATTTTATGCAAACTATGCAAAGAAAGTTGGGTTCGTTACTAAAATCAGGAACACAAATTTTGACAAGACGCGGAAGGAATCAAATATACCGGTTAATCAATCTATTCAATGCACGCGAGAAGGTTATCGAGAGTCTCGGGTGAACGCAGCAACTCGAGCAAACAGAATTACAGCCACGAGATGCAGAGCAAGGATGTATGTCATGCTGGACAAGGAGAAGGAAAGTTGGGTTGTGTCTAGATTAGAATTGAGGCATTATCTAATTATTGATTATTATAGATTTTGA 741 0.4507 QRRQLPPSNHPSGAPFSSEVKAPDSSHFLPVGGYGAWFSLPNINDTNLLHPAIQKVAVQGFRKRASSMEFSTPEGGLISTLINSTQGDEELSMGEVVIQEQEGSKVNKITDVIVTRKDELDFRHELPDHSGVSEEEIPVIGMSFGSLPLAQKFYANYAKKVGFVTKIRNTNFDKTRKESNIPVNQSIQCTREGYRESRVNAATRANRITATRCRARMYVMLDKEKESWVVSRLELRHYLIIDYYRF* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1655 246 Pfam FAR1 DNA-binding domain 152 237 IPR004330 -
Amo16g1655 246 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 90 237 - -
Amo16g1655 246 MobiDBLite consensus disorder prediction 1 15 - -
Amo16g1655 246 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1655 Amo-Chr16 32117478 32119434 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1655 FAR1 7.7e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1655 - K17604 ahf:112730161 252.292