Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1653 ATGGTACTCATGCTAAGATCATCCTCTTCATCGCCTGAGCTTCAAACTACTGCTGTTGATTCCTTCTCAGATCATCCTCTTCATCACGGCTTTTGCCCCAAGAACAGCATGCGAGTTTTGATTGATAAGTCTTTGGTGAAGATTGAAGATGATAGAGTGATGTTACATGATTTGATTCAAGATATGGGTAGAGAAATCGTTCGACAAGAGTCTGAAGAGCCTCGAGGGCATAGCAGGATTTGGAACTTTGAGGATGCAAAACGTGTTTTGGAACAAGACAAGGGTAGCCATAAAATTGAAATTATCAAGCTAGCATTCCCCAAAGCTGATGAAAAACTTAATTGGGATGGTGTAGCATTCATGAAGATGAATAATCTCAGAACAATTGTTATTAATAAAGGTGACTTTTCAGACAGTCCCAAACATCTTTCAAATAGTTTGAAAGTGCTTAAATGGAGAGGATATCCTTCACAAATTTTCCCATTTGATTTTTATCCAAAGGAAATAGCCATATTGTGGTTACCAGATAGTTCCATATCATCACTCATTAGTTTCTTTCAGAAGCAAAAGGCAAGTACAATACAAGAACACCTAGAACAAATACCTGATTTATCTGTTGCCCCACATTTGGAAGAATTGTCTTTCTGTTGGTGTAAGAACTTAACTGAAGTTCATAAATCAGTTGGGTTGCTAAATAAACTTAGAATGTTGGATGCAAAGGGTTGTTGCAAGCTTAGGAGTTTTCCAGACCTTATGTTGCCTGCTCTCCAGCAACTCCGCGTTTCGTCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATATTAGGGAAGATGGAAAGTTTAACAAAACTTGAGTTAGAATACACTCCAATAAAAGAATTCCCACCTTCAATTTGTTATATTACTAGGCTTGAAAGATTAGAATTGTGGCACTCTAAGATTCTTAAGTGCTTGAGAATTCGAAACTGTGATGGTTTGCTGTTACATTCACAAGAGAAAGTTGAGGAGCAAATAAGCTCAGTTGTGTTTTCCAATCAGCAACACTTTGATTTCAGAAACTGCAATGTATCAAATGAGTTTCTTCAAAGGAGTGTTCCTTGGTTAGTCAATGTGAAAGAGCTGAATCTATCATCCAACAGTTTCACAATTCTTCCTGCATGCATTGAAGGATGTACCTTCTTGAAGGTACTTATTTTGGATTATTGTGGGAATCTTCGAGAAGTCGGAGGGATTCCACCAAACATTGAAAAATTCTCTGCAAGAAGATGCATATTCTTAAAATTCTCTGTATGTGTTATTACCTGGAGCTGGAGGCAATGA 1317 0.3751 MVLMLRSSSSSPELQTTAVDSFSDHPLHHGFCPKNSMRVLIDKSLVKIEDDRVMLHDLIQDMGREIVRQESEEPRGHSRIWNFEDAKRVLEQDKGSHKIEIIKLAFPKADEKLNWDGVAFMKMNNLRTIVINKGDFSDSPKHLSNSLKVLKWRGYPSQIFPFDFYPKEIAILWLPDSSISSLISFFQKQKASTIQEHLEQIPDLSVAPHLEELSFCWCKNLTEVHKSVGLLNKLRMLDAKGCCKLRSFPDLMLPALQQLRVSSCSSLESFPEILGKMESLTKLELEYTPIKEFPPSICYITRLERLELWHSKILKCLRIRNCDGLLLHSQEKVEEQISSVVFSNQQHFDFRNCNVSNEFLQRSVPWLVNVKELNLSSNSFTILPACIEGCTFLKVLILDYCGNLREVGGIPPNIEKFSARRCIFLKFSVCVITWSWRQ* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1653 438 SUPERFAMILY "Winged helix" DNA-binding domain 28 90 IPR036390 -
Amo16g1653 438 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 27 428 IPR044974 GO:0006952
Amo16g1653 438 Gene3D Ribonuclease Inhibitor 69 431 IPR032675 -
Amo16g1653 438 PANTHER NB-ARC DOMAIN PROTEIN 27 428 - -
Amo16g1653 438 SUPERFAMILY L domain-like 116 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1653 Amo-Chr16 32081765 32083745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1653 30 317 WRKY Transcription Factor Family AT4G12020 33.227 2.32e-29 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1653 - - aip:107641428 762.681