Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1648 ATGATGGAAGAACATCTAACTCCATTGGCGGTTACACATCTTCTTCAACACACTCTTAGAAGCTTGTGCATCCATGACAATTCTCAGTGGGTCTATGCTGTTTTCTGGAGGATCCTCCCCAGAAACTACCCTCCACCAAAGTGGGAGGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGTTGATAGGGAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAGCCTAATGAACAAGAAATCAACTTCTTGTCAGCGTGGCATAATTCAGCTGATTCACATCCTAGGACTTGGGAAGCACAGTTCCAATCTGGAATAAAGACCATAGCTCTGATTGCTGTAAGAGAAGGTGTTGTTCAATTGGGAGCAGTTCACAAGGTGATTGAGGACTTGAGCTATGTGGTTCTACTGAGGAAGAAATTCAGCTACATAGAAAGCATACCAGGAGTTCTTCTACCACACCCTTCATCTTCTGCATACCCTTACAAAGTTGAAGGAGTAGTTGGATATGGTAACATCCCAGAACATGTTAATCATCATCATCATCATTGGCATCATCATTTCCAAGGAACAGTTATCCCTCCACCAACACCATCAACAGCAGCTGAACTCTTCTATGATCATCATTTCAACAATGGCAACAGCACCATGGCATTGAAGATTACTCCATCAATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTTCCTTCGGTGGTTCCCCCACAATCACAACAAGAACAAAGGGCGTTGGAGTTGATGGGGATTCAGAAAGTTGTAGCAAAAGAGGAGCTTGATAATGATGAAGTTTATAGGCCTGAGCTTGATGTTGGTGAGAGTAGCAGTTCCATGCATCAAGCCTATCATCATCATCATCATCAACAACAACACCATTTCCATCATCATAATAATAACAATAATAATAATAATAATAATAATGTAACTAGTAGTGGAGCCAATAATAATAATGCATTCTGA 993 0.4139 MMEEHLTPLAVTHLLQHTLRSLCIHDNSQWVYAVFWRILPRNYPPPKWEGQGAYDRSRGNRRNWLIGKVAADHSHKWIYKEPNEQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGVVGYGNIPEHVNHHHHHWHHHFQGTVIPPPTPSTAAELFYDHHFNNGNSTMALKITPSMSSLEALLSKLPSVVPPQSQQEQRALELMGIQKVVAKEELDNDEVYRPELDVGESSSSMHQAYHHHHHQQQHHFHHHNNNNNNNNNNNVTSSGANNNNAF* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1648 330 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 2 65 - -
Amo16g1648 330 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 63 147 IPR025610 -
Amo16g1648 330 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 65 306 - -
Amo16g1648 330 MobiDBLite consensus disorder prediction 306 330 - -
Amo16g1648 330 MobiDBLite consensus disorder prediction 282 330 - -
Amo16g1648 330 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 2 65 - -
Amo16g1648 330 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 65 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1648 Amo-Chr16 31363563 31365305 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1648 16 147 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.169 6.04e-11 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1648 - - adu:107494012 442.965