Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1647 ATGCCACTTCTTATAACAAGTATGGTCACAAATTCAATTTCCCTACCTAATATCAACAAAAATTCCCATCAACTTTCAGTGCTGTATGTGACAAAATTTTACACACCTTATTTTACTTTTTATTCTGTTTTTAATTCATTATTATTTTACTTAATTTGTTGTATAGGTGGGAGGGTCAAGGGGCTTATGATAGATCAAGAGGAAACAGAAGGAACTGGTAAATTAAGGTTGATAGGGAAAGTTGCTGCAGATCACAGTCACAAATGGATATACAAAGAGCCTAATGAACAAGAAATCAACTTCTTGTCAGCGTGGCATAATTCAGCTGATTCACATCCTAGGACTTGGGAAGCACAGTTCCAATCTGGAATAAAGACCATAGCTCTGATTGCTGTAAGAGAAGGTGTTGTTCAATTGGGAGCAGTTCACAAGGTGATTGAGGACTTGAGCTATGTGGTTCTACTGAGGAAGAAATTCAGCTACATAGAAAGCATACCAGGAGTTCTTCTACCACACCCTTCATCTTCTGCATACCCTTACAAAGTTGAAGGAGTAGTTGGATATGGTAACATCCCAGAACATGTTAATCATCATCATCATCATTGGCATCATCATTTCCAAGGAACAGTTATCCCTCCACCAACACCATCAACAGCAGCTGAACTCTTCTATGATCATCATTTCAACAATGGCAACAGCACCATGGCATTGAAGATTACTCCATCAATGAGTAGCCTTGAGGCACTTCTCTCTAAGCTTCCTTCGGTGGTTCCCCCACAATCACAACAAGAACAAAGGGCGTTGGAGTTGATGGGGATTCAGAAAGTTGTAGCAAAAGAGGAGCTTGATAATGATGAAGTTTATAGGCCTGAGCTTGATGTTGGTGAGAGTAGCAGTTCCATGCATCAAGCCTATCATCATCATCATCATCAACAACAACACCATTTCCATCATCATAATAATAACAATAATAATAATAATAATAATAATGTAACTAGTAGTGGAGCCAATAATAATAATGCATTCTGA 1029 0.3829 MPLLITSMVTNSISLPNINKNSHQLSVLYVTKFYTPYFTFYSVFNSLLFYLICCIGGRVKGLMIDQEETEGTGKLRLIGKVAADHSHKWIYKEPNEQEINFLSAWHNSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAVHKVIEDLSYVVLLRKKFSYIESIPGVLLPHPSSSAYPYKVEGVVGYGNIPEHVNHHHHHWHHHFQGTVIPPPTPSTAAELFYDHHFNNGNSTMALKITPSMSSLEALLSKLPSVVPPQSQQEQRALELMGIQKVVAKEELDNDEVYRPELDVGESSSSMHQAYHHHHHQQQHHFHHHNNNNNNNNNNNVTSSGANNNNAF* 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1647 342 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 77 318 - -
Amo16g1647 342 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 77 318 - -
Amo16g1647 342 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 77 159 IPR025610 -
Amo16g1647 342 MobiDBLite consensus disorder prediction 318 342 - -
Amo16g1647 342 MobiDBLite consensus disorder prediction 294 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1647 Amo-Chr16 31325996 31329290 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1647 77 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 39.286 4.97e-09 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1647 - - adu:107494012 442.965