Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1636 ATGGCCCCGGTGAACATAACCTCCATAAAAACCTCCTCAAGTGGGGCGTGGCAGGGCGACGATCCCTTAGACTACGCCTTCCCCCTCCTTATAGTCCAAACCACCTTGATCCTTGTAGTCACCCGCATCCTTGCCTTCCTCTTCAAACCCCTCCGCCAGCCCAAAGTCATTGCTGAAATTGTAGGGGGGATTCTGCTAGGGCCGTCGGCATTGGGGAGGAACAAAACCTACATGAACAAGTTGTTCCCAACGTGGAGCACTCCCATACTCGAATCAGTTGCCAGCATTGGCCTCTTGTTCTTCCTCTTCCTTGTTGGACTCGAACTCGACCTCAACTCAATCCGCCGCAGTGGCCGTCGCGCCTTCAGCATTGCCGCCGCCGGAATCTCTCTTCCCTTCGTCTGCGGTATTGGCGTTGCCTTCGTCCTCCGGAAGACCATCGACGGAGCCGACAAGGTCGGTTATGGCCAGTTCCTCGTCTTCATGGGCGTCGCCCTCTCCATAACCGCCTTTCCCGTCCTCGCTCGAATCCTCGCAGAGCTCAAGCTCCTCACCACGCCTGTAGGCGAGACCGCCATGGCCGCCGCCGCCTTCAACGACGTCGCGGCTTGGATCCTCCTCGCCCTCGCCGTAGCACTCGCCGGAAAGGCCGACGGTAGCGGCGGCCACAAGAGCCCCGTGGTGTCCGTGTGGGTTCTCCTCTCCGGCTTGGCGTTCGTCATTTTCATGATGATGGTTATCCGACCGGCGATGAAGCTGGTGGCGCAGCGGTGCTCGCGGGAGCACGATACGGTGGACGAGGCATATATTTGCTTAACCCTTGCTGGAGTGATGGTATCGGGATTCATGACAGATCTGATCGGGATCCACTCGATTTTTGGCGCGTTCGTGTTCGGATTGACGATTCCGAAGGGAGGGGATTTTGCGGAGAGGCTGATAGAGAGGATCGAAGATTTTGTGTCCGGGTTGTTGCTGCCGCTGTACTTCGCTTCCAGTGGGTTGAAGACTGACGTGGCAAAGATACGGGGCGGGAAGGCGTGGGGGCTGTTGGTGCTGGTCATATCGACGGCGTGCGCCGGGAAAATTCTGGGGACGTTGGTGGCGGCGTTGATGTGTATGGTTCCGGTTAGGGAGGCGGTGACACTTGGCGTCCTCATGAACACCAAGGGACTCGTGGAGCTCATCGTACTCAACATTGGAAAGGAGAAAAAGGTTCTAAACGACGAGATATTTGCAATCTTGGTGCTGATGGCATTGTTCACAACCTTCATAACAACCCCAATGGTGATGGCCATCTACAAACCAGCACGTGGCATCGCCATGAAGACCCACCGCAAACTCGGCGACTTAACCTCCAACTCCGCCAGCAACGAGAAGAAAGATGAGCTCCGAATCCTAGCTTGCGTCCATGGCCCCGGCAACGTCCCTTCCATCATAAGCCTCATTGAGTCAACTCGCAGCACCAAAAATTCCTTCGTCAAGCTCTTCATCATGCACCTTGTCGAGCTTACGGAGCGATCCTCCTCCATCATCTTGGTCCAACGGGTTAGAAAGAATGGTTTTCCGTTTTTTAAGCGGTCGCGCAATGGTGAGTGGCGCGACCGTTTAGCTGGAGCCTTTCAGGCCTACGGCCAATTGGGCCGGGTGTCGGTCCGGCCCACTACTGCAATCTCTTCTTTGCCTACAATGCACGAGGACATATGCCACGTGGCGGAGGAAAAGAGAGTGACCATGATCATCCTGCCGTTCCACAAGCACTGGAGCATGGAAGCTGATGACGAGGATAATGGTGGGGCCCACGAGGTGTTGGAAAACCTGGGCCATGGATGGAGAGGGGTGAACCAGAAGGTTCTCAAGCACGCGCCGTGTTCTGTGGGCGTGCTAGTGGACCGGGGTTTTGGAAGTGGGTCGCAAACTCCAGGCCCAGATAGCACGATGGGCCAACGGGTTTGCATCTTGTTCTTTGGTGGGCCGGATGATCGAGAGGCCTTGGAGTTGGGTGGGAGAATGGCTGAGCACCCTGTAGTTAGGGTCACTATTATCAGGTTTGTTGAGGAAGATGAATTGAATGGTAAAAATATTGTGTTACACCCCTCGCCAAATGCCAATTGCGACCAAAGTTATAGCTTCTCAACAGCTAAAATGAACCGTCAAATAGAGAAGGAGTTGGATGAGAAGGCAATGGGAGAGTTTCGAGGGAGATGGGGAGAGATAGTTGGGTATGTTGAGAAGGCCAGTGAGAATGTTGTGGAGGAGGCACTAGGCATAGGTAGAAGCGGAGATTATGATCTTATAGTAGTTGGGAAGGGTAGGTTTCCGTCGAGTATGGTAGCAAATTTGGCGGAGAGGCCGGCAGAACACGCAGAGTTGGGTCCCATAGGGGATGTTCTTGCATCTGCAGGGCACGGCGTGGTGACGTCAGTGTTGGTAATTCAACAACATGATGTAGCTTTGACTGATGAGGCACCGGCATTGAGGGTGTTACATGGTGGCTATGACAATGCCAGAGGGGATAATGATTCATCATCTAGTGCTAAAGAAATTTCATCAGTTGACAACAATGATATAGTGTGA 2574 0.5408 MAPVNITSIKTSSSGAWQGDDPLDYAFPLLIVQTTLILVVTRILAFLFKPLRQPKVIAEIVGGILLGPSALGRNKTYMNKLFPTWSTPILESVASIGLLFFLFLVGLELDLNSIRRSGRRAFSIAAAGISLPFVCGIGVAFVLRKTIDGADKVGYGQFLVFMGVALSITAFPVLARILAELKLLTTPVGETAMAAAAFNDVAAWILLALAVALAGKADGSGGHKSPVVSVWVLLSGLAFVIFMMMVIRPAMKLVAQRCSREHDTVDEAYICLTLAGVMVSGFMTDLIGIHSIFGAFVFGLTIPKGGDFAERLIERIEDFVSGLLLPLYFASSGLKTDVAKIRGGKAWGLLVLVISTACAGKILGTLVAALMCMVPVREAVTLGVLMNTKGLVELIVLNIGKEKKVLNDEIFAILVLMALFTTFITTPMVMAIYKPARGIAMKTHRKLGDLTSNSASNEKKDELRILACVHGPGNVPSIISLIESTRSTKNSFVKLFIMHLVELTERSSSIILVQRVRKNGFPFFKRSRNGEWRDRLAGAFQAYGQLGRVSVRPTTAISSLPTMHEDICHVAEEKRVTMIILPFHKHWSMEADDEDNGGAHEVLENLGHGWRGVNQKVLKHAPCSVGVLVDRGFGSGSQTPGPDSTMGQRVCILFFGGPDDREALELGGRMAEHPVVRVTIIRFVEEDELNGKNIVLHPSPNANCDQSYSFSTAKMNRQIEKELDEKAMGEFRGRWGEIVGYVEKASENVVEEALGIGRSGDYDLIVVGKGRFPSSMVANLAERPAEHAELGPIGDVLASAGHGVVTSVLVIQQHDVALTDEAPALRVLHGGYDNARGDNDSSSSAKEISSVDNNDIV* 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1636 857 Gene3D - 494 791 - -
Amo16g1636 857 MobiDBLite consensus disorder prediction 836 857 - -
Amo16g1636 857 PANTHER CATION/H + ANTIPORTER 4 828 - -
Amo16g1636 857 Pfam Sodium/hydrogen exchanger family 37 428 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Amo16g1636 857 MobiDBLite consensus disorder prediction 835 857 - -
Amo16g1636 857 Gene3D - 29 438 IPR038770 -
Amo16g1636 857 PANTHER BNAC06G14930D PROTEIN 4 828 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1636 Amo-Chr16 30915479 30925092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1636 77 840 Antiporter Super Family AT3G53720 67.358 0.0 950
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1636 - - adu:107491686 1620.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1636 16 30915479 30925092 Amo16g1636 16 30915479 30925092 ECH