Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1634 ATGACTGAGTTACTCGCCGAAAGCACAACACCGTCTTCTTCGTCGCTGCGCCTTCTTTGTCATCTTTTGATTGCAGCACCGTTTCCTGAGGTCTCGTCGCCGTCGTCTTCTGAGGGATGCAAGGAAGGGGTTAGGGTTTGGTGGTGGTGGAAGGAGCTGAATGGAGGAAACCATGAGGAGGAGCTTGATGATGCTAGCATTGATCCTGATGTTGATCTCTCTTACATTAGCATCAAGAGCAAGCAACCAGAAACGACAAATTTTGGCTTTCCAGCATCAGATGTTGGAGGATTGCAGGTTGATTGTCTTATTGGATCTGGAACATTTGGGACTGTGTATCATGGAAAATGGAGAGGCACTGATGTTGCAATCAAGCAGATTACTGATAGGTGTTTTGTAAGAAAGCCTTTAGAGCAAGAGCGAATGGCAATCAAGCTTGTTGACTTGCACCACCCAAATGTGGTGGCATTCTATGGTGTTGTCCTTGATGACCTAGGAGGTTCTGTGTCAACAGTAACTGAATATATGGTTAATGGTTCTCTAAGAACTGCTTTGCTAAAGAATGGAAGGTTTTGTGTTGATGGTCTTTCAATATTTGATGGTCTAAGTGTAAAAATTTAG 621 0.4396 MTELLAESTTPSSSSLRLLCHLLIAAPFPEVSSPSSSEGCKEGVRVWWWWKELNGGNHEEELDDASIDPDVDLSYISIKSKQPETTNFGFPASDVGGLQVDCLIGSGTFGTVYHGKWRGTDVAIKQITDRCFVRKPLEQERMAIKLVDLHHPNVVAFYGVVLDDLGGSVSTVTEYMVNGSLRTALLKNGRFCVDGLSIFDGLSVKI* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1634 206 ProSitePatterns Protein kinases ATP-binding region signature. 104 135 IPR017441 GO:0005524
Amo16g1634 206 ProSiteProfiles Protein kinase domain profile. 98 206 IPR000719 GO:0004672|GO:0005524|GO:0006468
Amo16g1634 206 PANTHER SERINE-THREONINE PROTEIN KINASE 58 190 - -
Amo16g1634 206 SUPERFAMILY Protein kinase-like (PK-like) 75 191 IPR011009 -
Amo16g1634 206 Gene3D Phosphorylase Kinase; domain 1 93 179 - -
Amo16g1634 206 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 58 190 - -
Amo16g1634 206 Pfam Protein tyrosine and serine/threonine kinase 99 188 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1634 Amo-Chr16 30895462 30898227 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1634 75 190 MAP Kinase Kinase Kinase AT3G46920 61.364 1.70e-41 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Amo16g1634 PK_Tyr_Ser-Thr 7e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1634 - - pvu:PHAVU_009G209700g 178.718