Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1614 ATGGATTCTCATAAACTAACGGCGCTTGTTGTTGATGATGATAGGATGGTTCGAATTATCCATGGAAAGATGTTGAACAGTGTTGGGGTGAAAAATCAAGTTGTGCAAAATGGTAAAGAAGCCATTAACGTTCATCTCTCTGGTCAAACCTTTGACCTAATTCTAATGGACCTGGATATGCCTATCATGAATGGCATCGAGGCAATAAAAGAACTTCGATCAATGGGAATTTGTAGCACCATTGCTGGTGTTTCAGCACGGTCAATGGAATCACATATTCAAGAATTTATGGAAGCAGGATTAGATGAATACTTAGAGAAGCCTCTTAATATTGCTAAGCTTACTTCATTCATTCACAAATTCTATGTTACAAATTAA 378 0.3704 MDSHKLTALVVDDDRMVRIIHGKMLNSVGVKNQVVQNGKEAINVHLSGQTFDLILMDLDMPIMNGIEAIKELRSMGICSTIAGVSARSMESHIQEFMEAGLDEYLEKPLNIAKLTSFIHKFYVTN* 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1614 125 SUPERFAMILY CheY-like 4 121 IPR011006 -
Amo16g1614 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 121 - -
Amo16g1614 125 CDD REC_hyHK_CKI1_RcsC-like 9 114 - -
Amo16g1614 125 SMART REC_2 6 118 IPR001789 GO:0000160
Amo16g1614 125 Gene3D - 2 124 - -
Amo16g1614 125 Pfam Response regulator receiver domain 9 117 IPR001789 GO:0000160
Amo16g1614 125 PANTHER TWO-COMPONENT RESPONSE REGULATOR 24 3 121 - -
Amo16g1614 125 ProSiteProfiles Response regulatory domain profile. 7 122 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1614 Amo-Chr16 30367975 30368442 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1614 6 122 Response Regulator Gene Family AT3G04280 41.176 1.87e-25 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Amo16g1614 Response_reg 2.2e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1614 - - rcu:8262779 164.081