Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1592 ATGAATGGGGTTCAGAACAGAAGAGTTCACAATGTTGAGAAACCTTTCCCTGGCTGCCTGGGAAGAATGGTCAACCTCTTTGATTTGACTGCTGGGGTTTCTGGAAATAGGTTACTCACTGATAAGCCACATCATGATGCTTCTTCACTTTTGAGAAGTCAATCAGATGTGGCAAGGATCACCAATCCTTCTTTTGGTGATCAATTAGAGGATAAGCTGATGGTTTCAGACTCGATGAGAGGATCTTCACAGAAGAGAATCAATGGAACACCCATCAAGATGCTCATAGACCAAGAGATGTCCAAAGAAATTGTTTCCAAGCATAATCCACCTAATGTAGTTGCCAAATTAATGGGGCTTGAAGCCCTCCCACGAGGAGAGCCTAATTTGGCCATGGAGAGAAGCTACAGAGGAGATTATTCTCAACATATGCATGGTCATTCAGGAACACCATTCAGACACTGGCAGCTGGAAGATAGATTTATGGACAAGGAAATGCTTCATGAAGGTCATCCGAGCACAGAACAGATTGCTTACAGAGATATTTATGAAATATGGCTTCAATCACAGAGAATGAACAATGTAAGAGACACGATGCCAAATGGAGAAAAGTGGACTGAAGATGTTAGTGCAAAAAAAATGGCGTTCATACGTCAGAAATTTATAGAAGCAAAACGTCTCTCTACAGATGAGAGACTGCGCCAGTCCAAGGAGTTTGATGAAGCCTTGGAAGTTTTAAGCTCCAATAATGACCTACTAATCCGGTTATTGGATTCTCAAAATCTTTATGAGCTTCAGTCTACTCCGATTGCTGAGACTAAGCGTATTACTGTTCTTAAACCGTCGAAGATGGTTGACCGTGAAAAACCCTGTGCCAAGGGCAAGAATGATAAATATGTTAAGAAACCAACAAATATTGGCCAAGCAGCTGCTTGGGAGAAAACTAGTCCTGTGTATTCTCCAGCCAGCCAGAAAGTTGATGATTTCCCGGTTCAACCTACTCGAATAGTGGTATTGAAACCTAGCTCTGGGAAGACTCATGAGATTAAGGCTGTGCTTTCTCCGACAACTTCATCTCCTCGGAATCTGCACACTGGAAGTTTATATCACGGTCTTGAAGATTGTGATGCACTAGAGCAAACAACAAATGCAAGCGAAATCGCACAGCAAATACCTGAAAGCCTGAGGAGCCATCAAAGAGATGAAACATTGCATTCTTCAGTATTTTCCAATGGATATATCGGAGATGAAAGTTCATTTTACAAATCAGATAATGAGTATGCTGCAGGAAATTTGAGTGATTTGGAACTTATGTCACCATCTCCAAGGCATTCTTGGGATTACATCAATCGCTGTGGCAGCCCTTTTTCTTCATCATCCTTCAGTCGTGCTTCCTGTTCTCCTGAGTCATCTGTTTGCCGAGAGGCCAAGAAACGACTTTCTGAAAGATGGGCCATGATGGCATCAACTAAAGGTACACAAGAGCAGAGACATCTTCGGAGAAGCTCTACATTAGGTGAGATGCTCGCTCTTTCAGATATGAAGAAAGTTATAATATCTGAGGTTGAGGATATTAACAGAGACCAAGGACCTAGCTACTCTGTTTCTTGCAGTCGTAATATTAGTGAAGAAATATGCATGGATGGATCTCCTAAGAATCTTCCTAGGTCAAAATCTGTCCCTGTATCTTCCACTGTCTATGAAACTGGGCCCAGCACTGAAGTTTGTGATCATGATACTAGAAAAGCACATGTCTCCAAGGAGTTGACAAAGTCAAAGAGTATGAAATCATCATTTAAAGGGAAAGTTACAAATTTCTTTTTGTCAAGAAATAAGAGATCAACCAAGGAGAAGTCTTTTCTATCTCAATCCAAAGAGGAATCTCAGTCAACTCTAACTGATACGTCAGTATCTCCAGTAAATTCACGTGGAGTTAGAGATGGTGAGTCTCAAAGCTTCAACAGCGGTGCCTTTGCAGAGTGTTCTCTTCCAGCTGTATATGAATCATCTGGAAAATCACATTCAGACTCTGATGGACAAGGCGTAATATCTCTCGAGTCCACAGTGCCTGGGACATCAACAGAAAACCAGGATCAGCCTAGTCCAATCTCAGTTTTAGAACCTCCTTTTGAAGATGAGAATGCAGCTCATGGATCCTTAGACTGTATGAAGGGTGGTCAGCTGGGATCACGGCTGCTTATGAAGTCTAATTTAATTGATAAATCACCACCCATAGAATCAATAGCTCGGACCCTGTCATGGGATGACTCTTGTGCAGAGGTAGCAAGTCCCTATCCGTTAAAACCATCATTGGTCTCCCTAGACACCAAGGTGGAGGAACAAGATTGGTTTGTTCTCGTTGATAAACTACTATTGGCAGCTGGACTTGACGATCAAGTGCAGTCTGACTCATTTTACCCAAGATGGCATTCCCTTGACAGTGCTTTGGATCCATCATTGAGGGATAACTACTCCAATCCGGATGACAAGGAGCCTCAGCCTCTCCCTGAAGCCCGGCGAAGGCAGAGGAGATCCAACCAGAAGCTAGTATTTGATTGTGTCAATGTAACCCTAATGGAGATTACTGGTTATGGATCGGAGAAGTACTTAAGGTTGTGGGGTGGGAATAGTCGCTGCATGTTCCCAGTCCTGGAGGGTGCAACTCCTCCATTGGTGGACCTCATTGTGGCCCAGATGAAGGATTTAATATCTGGTGGGATGAGGTCTCTTTGGGGTGACTGTGGGGACAGTAACAGCCTGGTTGTGGAGAGTGTTGTCAGAAAAGAGGTTGTGGGGAATGAGTGGGTTGAGCTTATGGGTCTGGAGATGGATATTTTGGTTAAGGTGGTAGAGGGGAAGTTGCTGGAAGAACTTGTGGAGGATGCTGTGCTTGATTTGACAGGCAGGGCTTGA 2913 0.4339 MNGVQNRRVHNVEKPFPGCLGRMVNLFDLTAGVSGNRLLTDKPHHDASSLLRSQSDVARITNPSFGDQLEDKLMVSDSMRGSSQKRINGTPIKMLIDQEMSKEIVSKHNPPNVVAKLMGLEALPRGEPNLAMERSYRGDYSQHMHGHSGTPFRHWQLEDRFMDKEMLHEGHPSTEQIAYRDIYEIWLQSQRMNNVRDTMPNGEKWTEDVSAKKMAFIRQKFIEAKRLSTDERLRQSKEFDEALEVLSSNNDLLIRLLDSQNLYELQSTPIAETKRITVLKPSKMVDREKPCAKGKNDKYVKKPTNIGQAAAWEKTSPVYSPASQKVDDFPVQPTRIVVLKPSSGKTHEIKAVLSPTTSSPRNLHTGSLYHGLEDCDALEQTTNASEIAQQIPESLRSHQRDETLHSSVFSNGYIGDESSFYKSDNEYAAGNLSDLELMSPSPRHSWDYINRCGSPFSSSSFSRASCSPESSVCREAKKRLSERWAMMASTKGTQEQRHLRRSSTLGEMLALSDMKKVIISEVEDINRDQGPSYSVSCSRNISEEICMDGSPKNLPRSKSVPVSSTVYETGPSTEVCDHDTRKAHVSKELTKSKSMKSSFKGKVTNFFLSRNKRSTKEKSFLSQSKEESQSTLTDTSVSPVNSRGVRDGESQSFNSGAFAECSLPAVYESSGKSHSDSDGQGVISLESTVPGTSTENQDQPSPISVLEPPFEDENAAHGSLDCMKGGQLGSRLLMKSNLIDKSPPIESIARTLSWDDSCAEVASPYPLKPSLVSLDTKVEEQDWFVLVDKLLLAAGLDDQVQSDSFYPRWHSLDSALDPSLRDNYSNPDDKEPQPLPEARRRQRRSNQKLVFDCVNVTLMEITGYGSEKYLRLWGGNSRCMFPVLEGATPPLVDLIVAQMKDLISGGMRSLWGDCGDSNSLVVESVVRKEVVGNEWVELMGLEMDILVKVVEGKLLEELVEDAVLDLTGRA* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1592 970 MobiDBLite consensus disorder prediction 624 653 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 669 718 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 823 843 - -
Amo16g1592 970 Pfam Domain of unknown function (DUF4378) 784 961 IPR025486 -
Amo16g1592 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
Amo16g1592 970 PANTHER M REDUCTASE II SUBUNIT GAMMA, PUTATIVE (DUF3741)-RELATED 1 969 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 669 703 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 617 653 - -
Amo16g1592 970 Pfam Protein of unknown function (DUF3741) 218 261 IPR022212 -
Amo16g1592 970 MobiDBLite consensus disorder prediction 556 571 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 817 843 - -
Amo16g1592 970 MobiDBLite consensus disorder prediction 548 575 - -
Amo16g1592 970 Pfam DUF761-associated sequence motif 110 124 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1592 Amo-Chr16 29588710 29594420 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1592 1 967 TRM (TON1 Recruiting Motif) Superfamily AT4G28760 43.561 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1592 - - var:108322999 1433.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1592 16 29588710 29594420 Amo12g0962 12 22365996 22370845 PCT
Amo12g0962 12 22365996 22370845 Amo16g1592 16 29588710 29594420 PCT