Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1587 ATGGTTGCTGCTACCACTCCTATAGTTGGGTCCCATGTTTGGGTTGAGGATTCTGAAGTAGCATGGATAGATGGTGAAGTCTTGGAGGTTAATGGAGAAGAAGTTAAAGTCTCTTGCACTTCAGGGAAGACGGTTGTTGTTAAAGTGTCCTGTATTTATCATAAAGACACTGAAGTTCCGCCAAGTGGAGTAGACGATATGACAAAGCTTGCATACCTACACGAACCTGGTGTACTAGAAAATCTGAGATCAAGATATGATATCAATGAAATTTACACTTACACTGGAAATATATTGATTGCGGTGAACCCTTTTGTAAAGCTTCCTCATTTATATGATAGTCATATGATGGCACAATATAAAGGAGCAGTGTTTGGTGAGCTAAGTCCACATCCCTTTGCTGTTGCAGATGCTGCATATAGGCTTATGATAAATGAGGGAATCAGCCAGTCAATATTAGTCAGCGGTGAAAGCGGAGCTGGTAAAACAGAAAGTACTAAGTTGCTCATGCGGTATCTTGCCTACATGGGAGGGAGAGCTGCTGCTGAAGGTAGAACTGTTGAGCAAAAAGTCTTGGAGTCCAATCCTGTTCTTGAAGCCTTTGGGAATGCAAAGACGGTTAGGAACAATAATTCAAGTCGTTTTGGTAAGTTTGTGGAGATTCAATTTGATCAGAGGGGAAGAATTTCAGGAGCTGCTATCAGAACATATCTGCTGGAAAGATCGCGTGTTTGTCAGCTATCAGACCCAGAGAGGAATTATCACTGTTTCTACATGCTCTGCGCTGCACCGCAGGAGGAGATTATGAAGTACAAGTTAGGACATCCAAAAACATTTCACTATCTGAATCAATCAAATTGCTATGAGTTAGAAGGGATTGACGAACATAAAGAATATATAGCTACAAGGAGAGCAATGGATGTTGTTGGAATGAGTTCTGAGGAGCAGGATGCAATATTTCGAGTTGTTGCTGCAATTTTGCATCTTGGCAACATTGAGTTCATGAAAGGGAAGGAGATAGATTCATCTGCTCCAAAAGATGAGAAATCTCGGTTCCATCTACAGACCGCAGCTGAGCTTTTCATGTTGGTTGACAAGATTAATAGTTCAATTGGACAAGATACTGACTCAAAATCCTTAATTGGTGTGCTTGATATTTATGGTTTTGAGAGTTTTAATATCAACAGTTTTGAGCAATTTTGTATTAATTTGACCAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTCAAAATGGAGCAGGAAGAATACAAGAAGGAGGAGATCGATTGGAGTTATATTGAATTTGTTGACAATCAAGATATTCTAGATCTCATTGAAAAGAAACCTGGTGGCATTATTGCTCTTTTGGATGAAGCTTGCATGTTTCCTAGATCAACACATGAAACTTTTGCTCAAAAGCTGTATCAGACCTTCAAAAACCATAAAAGGTTTAGCAAGCCCAAGTTATCACTTAGTGACTTCACAATTTGCCATTATGCCGGTGATGTCACTTATCAAACTGATTTATTCCTCGACAAGAACAAAGATTATGTTGTAGCTGAACACCAAGCACTTCTTTATGCTTCTAAATGCCCCTTTGTATCGGGTTTGTTTCCACCTTCTCCTGAAGAATCATCCAAACAATCAAAGTTCTCTTCAATTGGTTCACGATTTAAGCAACAATTGCAATCCTTGCTTGAAACTCTCAGTTCCACTGAGCCACATTACATCCGTTGTGTGAAACCCAATAATTTTCTCAAGCCAGCAATTTTTGAGAATAAAAATGTCTTGCTGCAACTCCGTTGTGGGGGAGTTATGGAGGCAATTAGGATTAGCTGTGCTGGGTATCCCACTCGGAAAACCTTTGATGAATTTGTGGATCGATTTGGCCTTCTTGCACCTGATGCTTTGGTCGGAAGCTCCGATGAAGTTCAAGCTTGCAAGAGGATTCTGGAGAATGTTGGACTTGAAGGCTATCAGATTGGTAAAACAAAGGTTTTTCTTCGAGCTGGTCAAATAGCAGAATTAGACACCCGCAGAAGTGAGATCTTAGGACGCTCAGCAAGCATTATTCAGCGGAAAATCCGCTCTTATTTGGCTCGCCAGAGTTTTGTCTCCCTTCGTTTGTCTGCTGTGCAGATACAAGCCGCATGCAGAGGACAACTTTCTCGGCATGTTTACGAGGGAATGCGGCAGCAGGCTTCTAGTTTGGTGATTCAGAGATATTTCCGCATGTATAACGCTAAGAAGGCATACGAAGAATTATATATGTCTGCTGTCTGTATTCAGACTGGTTTGCGGGTAATGGCTGCTCGTTGTGAGCTATGCTTTAGAAGGCGTACTAGAGCAGCGATTATCATTCAGAGCCATTGCAAGAAGTACTTGGCACAACTTGATTTTATGAAATTAAAGAAGGCAGCAATTGCAACACAATGTGCATGGAGAGGAAAAATGGCGAGGCGAGAACTGCGGAAACTCAAGATGGCTGCAAGAGAAACAGGAGCTCTCCAAGCTGCTAAAAATAAGCTTGAAAAGCAAGTTGAAGACCTTACATTGAGGTTGCAGCTGGAAAAACGTTTGAGGGTTGACATGGAAGAAGCGAAAACACGGGAAAATGAAAAATTACAATCTGCTTTGGATGAGATGCAACTTCAGTTTAAAGAAACTAAAGTACTTCTTGAAAAGGAGCAGAAGGCTGCAAAAAGAGCAATGGAGATTGTACCTGTCATACAGGAGGTTCCAGTTGTTGACCACTCTTTGTTGGAGAAGCTTAGTAGTGAAAATGAAAAACTTAAGAACTTGGTGAATTCACTGGAAAAGAAAATTGATGAAACAGAGAAAAGGTATGAAGAGGCAAATAGAATTGGTGAAGAAAGGTTGAAGCAAGCTTTGGATGCAGAATCGAAAGTAATCCAGCTGAAGACTGCTATGCAAAGGCTTGAAGAGAAATTCTCAGATATCGAATCTGCAAACCATATTCTTCAGAAACAATCTCAGCTAAACTCATCTGTGAAAACAATAGCAGAACACATCGCAACACCTATAGAGGAGAAGCTGGAAAATGGTCACCATGTCGTTGAAGAGCATAAAGCTGTTGAAACGTGTGTTACGCCTGTGAAACTATTTGGTACAGATTCTGACAGTAAATTGAGGAGGTCTTACATTGAACGACAACATGAGAATGTTGATTTACTTGTCAACTGTGTTATGAAAAATATTGGCTTCAATAATGAAAAGCCTATTGCTGCTTTTACCATTTACAAATGTCTTCTACACTGGAAATCATTTGAAGCCGAAAGAACTAATGTATTTGATCGCCTTATCCAGATGATTGGTTCTGCAATTGAGGATGAAGATGGAAATAATCTTATGGCCTATTGGTTGTCTAATACCTCTGCGTTATTATTTTTACTCGAACAAAGCCTTAAATCTCATGGTGCATCAACTGCTACCCCAGCTAAAAAACCACCTAATCCAACATCCCTCTTTGGAAGAATGACCAGGAGTTTTCTCTCATCCCCTTCTTCTGCAAACCTTGCCACCCCTGCATCGGAGGTTGTACGCAAGGTAGAGGCTAAATACCCGGCTTTACTTTTCAAGCAACAGCTCACCGCCTATTTGGAGAAAATTTATGGCATCATTCGGGACAACTTGAAGAAGGAGTTAACACCAATGCTTGCATTATGTATCCAGGCACCAAGAACATCAAAAGCAACGTTACGGTCTTCTGGTCGATCCTATGGTAAAGATTCTCCTATGGTTCACTGGCTGACTATTATCGAATCCCTCAACACCCTCCTCTGTACTCTGAAAGAGAACTTTGTGCCTCAAGTTCTTATCCAAAAGATTTTCAGTCAAACATTCTCGTATATTAATGTCCAACTCTTTAATAGTCTTCTTCTGCGCCGTGATTGTTGTACGTTCAGCAATGGGGAATATGTGAAAGCTGGATTAGCTGAATTAGAACTGTGGTGCTGTCAGGCCAAGGAAGAGTATGCAGGGTCATCTTGGGATGAGCTCAAGCACATAAGACAGGCTGTTGGATTCTTGGTAATTCATCAGAAGTATAGGATTTCCTATGATGAAATCATTAATGATTTATGCCCTATCCTAAGTATCCAGCAGCTGTATAGAATATGCTCGCTTTACTGGGATGCTAACTACAATACTCGAAGCGTATCTCCTGATGTCCTTTCAAGCATGAGGATGCTTATGGTCGAGGACTCCAATAACGCTCAGAATGATTCTTTCTTGTTGGATGATAGCTCCAGCATTCCTTTCTCAGTGGATGACCTGTCTATATCACTGCAAGAGAAGGATTTCTCAGACATGAAACTGGCGGAGGAGCTTCTCGAGAATCCAGACTTCCAATTTTTAAATGAGTAG 4392 0.4071 MVAATTPIVGSHVWVEDSEVAWIDGEVLEVNGEEVKVSCTSGKTVVVKVSCIYHKDTEVPPSGVDDMTKLAYLHEPGVLENLRSRYDINEIYTYTGNILIAVNPFVKLPHLYDSHMMAQYKGAVFGELSPHPFAVADAAYRLMINEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAAEGRTVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQRGRISGAAIRTYLLERSRVCQLSDPERNYHCFYMLCAAPQEEIMKYKLGHPKTFHYLNQSNCYELEGIDEHKEYIATRRAMDVVGMSSEEQDAIFRVVAAILHLGNIEFMKGKEIDSSAPKDEKSRFHLQTAAELFMLVDKINSSIGQDTDSKSLIGVLDIYGFESFNINSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKNHKRFSKPKLSLSDFTICHYAGDVTYQTDLFLDKNKDYVVAEHQALLYASKCPFVSGLFPPSPEESSKQSKFSSIGSRFKQQLQSLLETLSSTEPHYIRCVKPNNFLKPAIFENKNVLLQLRCGGVMEAIRISCAGYPTRKTFDEFVDRFGLLAPDALVGSSDEVQACKRILENVGLEGYQIGKTKVFLRAGQIAELDTRRSEILGRSASIIQRKIRSYLARQSFVSLRLSAVQIQAACRGQLSRHVYEGMRQQASSLVIQRYFRMYNAKKAYEELYMSAVCIQTGLRVMAARCELCFRRRTRAAIIIQSHCKKYLAQLDFMKLKKAAIATQCAWRGKMARRELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDMEEAKTRENEKLQSALDEMQLQFKETKVLLEKEQKAAKRAMEIVPVIQEVPVVDHSLLEKLSSENEKLKNLVNSLEKKIDETEKRYEEANRIGEERLKQALDAESKVIQLKTAMQRLEEKFSDIESANHILQKQSQLNSSVKTIAEHIATPIEEKLENGHHVVEEHKAVETCVTPVKLFGTDSDSKLRRSYIERQHENVDLLVNCVMKNIGFNNEKPIAAFTIYKCLLHWKSFEAERTNVFDRLIQMIGSAIEDEDGNNLMAYWLSNTSALLFLLEQSLKSHGASTATPAKKPPNPTSLFGRMTRSFLSSPSSANLATPASEVVRKVEAKYPALLFKQQLTAYLEKIYGIIRDNLKKELTPMLALCIQAPRTSKATLRSSGRSYGKDSPMVHWLTIIESLNTLLCTLKENFVPQVLIQKIFSQTFSYINVQLFNSLLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEIINDLCPILSIQQLYRICSLYWDANYNTRSVSPDVLSSMRMLMVEDSNNAQNDSFLLDDSSSIPFSVDDLSISLQEKDFSDMKLAEELLENPDFQFLNE* 1464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1587 1463 Pfam Myosin head (motor domain) 362 671 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 Pfam Myosin head (motor domain) 64 360 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 Pfam DIL domain 1285 1388 IPR002710 -
Amo16g1587 1463 Pfam IQ calmodulin-binding motif 737 754 IPR000048 GO:0005515
Amo16g1587 1463 Pfam IQ calmodulin-binding motif 688 706 IPR000048 GO:0005515
Amo16g1587 1463 Pfam IQ calmodulin-binding motif 712 729 IPR000048 GO:0005515
Amo16g1587 1463 Pfam IQ calmodulin-binding motif 783 800 IPR000048 GO:0005515
Amo16g1587 1463 Pfam IQ calmodulin-binding motif 807 826 IPR000048 GO:0005515
Amo16g1587 1463 PANTHER MYOSIN-14 363 1461 - -
Amo16g1587 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 736 IPR027417 -
Amo16g1587 1463 PANTHER MYOSIN 7 362 - -
Amo16g1587 1463 CDD MYSc_Myo11 76 671 IPR036018 -
Amo16g1587 1463 SMART MYSc_2a 56 684 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 Gene3D - 389 542 - -
Amo16g1587 1463 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 ProSiteProfiles IQ motif profile. 805 834 IPR000048 GO:0005515
Amo16g1587 1463 SMART DIL_2 1284 1391 IPR002710 -
Amo16g1587 1463 Pfam Myosin N-terminal SH3-like domain 9 49 IPR004009 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 PANTHER MYOSIN-14 7 362 - -
Amo16g1587 1463 ProSiteProfiles Myosin motor domain profile. 62 683 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 ProSiteProfiles Dilute domain profile. 1107 1409 IPR002710 -
Amo16g1587 1463 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Amo16g1587 1463 Coils Coil 923 957 - -
Amo16g1587 1463 Gene3D - 686 735 - -
Amo16g1587 1463 Gene3D - 784 833 - -
Amo16g1587 1463 Gene3D - 736 783 - -
Amo16g1587 1463 CDD MyosinXI_CBD 1058 1432 IPR037975 GO:0007015
Amo16g1587 1463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 736 834 IPR027417 -
Amo16g1587 1463 ProSiteProfiles IQ motif profile. 734 760 IPR000048 GO:0005515
Amo16g1587 1463 Coils Coil 965 999 - -
Amo16g1587 1463 Gene3D Myosin VI head, motor domain, U50 subdomain 310 376 - -
Amo16g1587 1463 ProSiteProfiles IQ motif profile. 709 738 IPR000048 GO:0005515
Amo16g1587 1463 Gene3D Kinesin motor domain 544 617 IPR036961 -
Amo16g1587 1463 Gene3D Kinesin motor domain 12 295 IPR036961 -
Amo16g1587 1463 Gene3D - 618 684 - -
Amo16g1587 1463 Coils Coil 828 901 - -
Amo16g1587 1463 PANTHER MYOSIN 363 1461 - -
Amo16g1587 1463 ProSiteProfiles IQ motif profile. 688 715 IPR000048 GO:0005515
Amo16g1587 1463 SMART iq_5 733 755 IPR000048 GO:0005515
Amo16g1587 1463 SMART iq_5 708 730 IPR000048 GO:0005515
Amo16g1587 1463 SMART iq_5 685 707 IPR000048 GO:0005515
Amo16g1587 1463 SMART iq_5 781 803 IPR000048 GO:0005515
Amo16g1587 1463 SMART iq_5 804 826 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1587 Amo-Chr16 29341382 29352511 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1587 1 1462 Myosins gene family AT5G43900 71.551 0.0 2212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1587 K10357 - gmx:100795648 2523.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo12g0946 12 21579682 21597083 Amo16g1587 16 29341382 29352511 PCT