Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1581 ATGTCCTCGTTTATCGATTTTAGGGGAAAGAATCTGAAGACGCTATTCAGAAAAAGGATGATGCTACGGTCCCGGATCACTGGAATTCCAGTGGAGGAAATCCCGTACGTAGGATTGAGATTTGATTCGTTACAGCGGGCACAAGAGTTCTATTCTAATTATTCGAAGAAAGTTGGGTTTGTGACGAGGATTAGGAATACAAACTTTGACAAGACCAGGAAGGAATTAAAGGTACCTATTAATCAATCGATACACTGTAGTCGTGAAGGTTATCGGGAATCTCGAGTGAAGGCAGCAATGCGGGTAAAGAGAATAACAACAGCTGGGTGCAAAGAAAGGATGTACGTGATGCTTGATAGGCATAATGATAATTGGCTGGTGACCAAATTAGAATTGAAGCACACCCACGCGTGTTCTGCCGAGCAAGCTGTGCATTACAGTGAGTACAGGGAACCGACCATGCATGTCAAGTGTGTGATTTAG 483 0.4348 MSSFIDFRGKNLKTLFRKRMMLRSRITGIPVEEIPYVGLRFDSLQRAQEFYSNYSKKVGFVTRIRNTNFDKTRKELKVPINQSIHCSREGYRESRVKAAMRVKRITTAGCKERMYVMLDRHNDNWLVTKLELKHTHACSAEQAVHYSEYREPTMHVKCVI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1581 160 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 33 138 - -
Amo16g1581 160 Pfam FAR1 DNA-binding domain 49 138 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1581 Amo-Chr16 29203138 29203740 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1581 FAR1 7.4e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1581 - - ahf:112785545 262.692