Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1574 ATGGGAATTGAAGCGGAGGAATACTTTGGTGACTATGAAAGTAAGGATGATGGGTTCGATTCGGATGAAGGAGTGTGGCCAGATGATGTCCTTCGAATGGAATTTAACACTCTAGATGAAGCCAGATCCTTTTATAATAACTATAGCCGATTAAAGGGGTTTTCTACAAGGCAAGGGAGGAAGGTAACAAATAGTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGAGAGAAGAAATGGTTAGAGATGGCTAATCGAAACGGGAGCACAAGACTGTGA 297 0.4276 MGIEAEEYFGDYESKDDGFDSDEGVWPDDVLRMEFNTLDEARSFYNNYSRLKGFSTRQGRKVTNSAGDIVRYTFVCNRQGYREKKWLEMANRNGSTRL* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1574 98 MobiDBLite consensus disorder prediction 1 22 - -
Amo16g1574 98 Pfam FAR1 DNA-binding domain 43 88 IPR004330 -
Amo16g1574 98 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 26 97 - -
Amo16g1574 98 MobiDBLite consensus disorder prediction 8 22 - -
Amo16g1574 98 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 26 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1574 Amo-Chr16 29149535 29149831 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1574 FAR1 9.3e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1574 - K17604 aip:110263248 207.994