Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1567 ATGCGGAAGGATGCAAAGATACCCATTAATCAGTCTCTTCACTGCACTCGGGAGGGTTATCGAGAATCTCGTGTTAAGGCAGCAACTAGGTCAAATAGAATAACAGCCACGAGATGCAAAGCAAGAATGTATGTCATGCTGGACAGGGAGAAGGAATGTTGGGTTGTGTCCAAGGTAGAATTGAGGCATTCTCACCCCTGTTCGGCTGATAAAGCTGTCCACTATCATGAGTACCGGGAGCTGACCATGCATGCCAAGTGCGTCATTACGGATAACGATGAGGCTGGCATAAGACCCAACAAGACGTATCTAGCACTTACAAACGAAGTTGATCTTTATGTGAATCGACGTAAGTGGGTGCCAATATTCTTCAAGAGTGAATTTTGGGCCGGCATGAGGAGCACACAGCGGAGTGAAAGTATGCACGCATTCTACGGTGGATACCTTCATTGCAAGAGTGGATTGGTTCAGTTCGTCCATGAATATGATAACGTACTTGAAAACAAGGAGCAAAAAGAGCTTGAAGATGATGCTGCGGACTCGAAAGGAGTCATCCCATGTATAGGGAGCACAGGCATTGAGCGACAGTTTCAGCAGGAATACACCAGTAATATGTTCCGGACCCTTCAGTTGGAGGTAAGGAAAAAAACCGATTGTGTGGTTCGATCAACTGAACAAAAGGGAGATACAATTTCTATTAAAGTGGATGAGCAGAAGGTATTTTGGGGGAAGCCTGTCTACCATACTTTCATAGTACAGTTTGACCCTTTGAGTCGAAAGAGTCGGTGCGGGTGCAACAAATTTGAATCCGTTGGTATATTGTGTTGCCATATCCTTGCGATCTGGTCATACTATAGAGTTGACACAGTACCTAGCTGCTATGTTCTTCCTCGATGGAGTAAGAATGTCATCCGCAAGCACACTTACATTAAGAGTAGCCATGACGTGGCTCGAAGTAATGAAAGCCACAATTTGTTTAGGAATCTGTGTTCGGAGTTCTATAACGTTGCTCAGGAGTTTGTTGCTTGTGAAGAGGAAGCAGCCATCTTGCGAGCTGCCCTTTTGGATGCAAAGTCCAAGCTGACTGATCATCGTGCTAGCATGCGTTCCTCCACTCTTGATGGGACTCAGAATAGGATGCCCACACGGAGCACATGTGATGTTATTTTACATGACATACAGGGACCTTCAAGGGTGAAAACCAAAGGACGGCCTAAGGGTAAGAGACTTGGAGCAGAGTTGGACAAGTCAATTAAGAAGTCAATGGAAAATAGGAAGAGGAAATCACAACCGGATGTTGTTGACCCTCGGACAGATAATGATTGCCACGGTTCTGTAGACAACAGAGTTGAGGATTCTACTATATGGAATTCAGCAGATGGTGGCGGATTCATGGACCTGTTGAACTCTTTTAGGCATTTATAG 1425 0.4512 MRKDAKIPINQSLHCTREGYRESRVKAATRSNRITATRCKARMYVMLDREKECWVVSKVELRHSHPCSADKAVHYHEYRELTMHAKCVITDNDEAGIRPNKTYLALTNEVDLYVNRRKWVPIFFKSEFWAGMRSTQRSESMHAFYGGYLHCKSGLVQFVHEYDNVLENKEQKELEDDAADSKGVIPCIGSTGIERQFQQEYTSNMFRTLQLEVRKKTDCVVRSTEQKGDTISIKVDEQKVFWGKPVYHTFIVQFDPLSRKSRCGCNKFESVGILCCHILAIWSYYRVDTVPSCYVLPRWSKNVIRKHTYIKSSHDVARSNESHNLFRNLCSEFYNVAQEFVACEEEAAILRAALLDAKSKLTDHRASMRSSTLDGTQNRMPTRSTCDVILHDIQGPSRVKTKGRPKGKRLGAELDKSIKKSMENRKRKSQPDVVDPRTDNDCHGSVDNRVEDSTIWNSADGGGFMDLLNSFRHL* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1567 474 MobiDBLite consensus disorder prediction 406 448 - -
Amo16g1567 474 ProSiteProfiles Zinc finger SWIM-type profile. 250 286 IPR007527 GO:0008270
Amo16g1567 474 MobiDBLite consensus disorder prediction 397 448 - -
Amo16g1567 474 PANTHER OS03G0843700 PROTEIN 112 350 - -
Amo16g1567 474 SMART 26again6 261 288 IPR006564 GO:0008270
Amo16g1567 474 Pfam FAR1 DNA-binding domain 8 67 IPR004330 -
Amo16g1567 474 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 112 350 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1567 Amo-Chr16 29073665 29076223 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Amo16g1567 FAR1 2.6e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1567 - - ahf:112730161 620.928