Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1532 ATGAGACGGCGCCCCGTTACGGGCGTTCTCTCCGATCAGATGGAGAAGTCTGCGCCCAAGAATCAAAATTCTCGAATCTGCTTCCTCGCCGCTCTCTCCGCTTTCTTCTGGCTCCTCCTCCTCTACTTCCACTTCGTCTTCATCAACCCCACTACTTTCGACGCCAATAAAGACGAAGATGATGATTCCAATGAATTACCTGTACAGCGGCTCCAGCCTCCGCCGCGGAAGCAGATTGGCTTCCCCGATCTCGATTCAGATTCCCAAAACCTAAACAAAAACCCTAATAATTCTCCTCTAAAGGAGAGGAATTTCCCCTTCATGAAAGCGCTGACAACCGCAGACAACAAGAACGACCCTTGCGCTGGAAAGTACATTTATGTCCACGACCTTCCATCGAGGTTCAACGAGGACATGCTCAAAGAGTGCAGAAGCTTGAGCCTTTGGACGAACATGTGCAAGTTCACCACAAATGCTGGCCTTGGTCCACCTCTCGAGAACGTTGAAGGTGTTTTCTCCAACACCGGTTGGTACGCCACAAACCAGTTCGCAGTTGATGTTATATTCAGCAACAGGATGAAGCAGTACGAGTGCTTGACCAAGGATTCCTCCATTGCCGCCGCATTCTTCGTGCCGTTCTACGCCGGATTCGACATTGCACGGTACCTTTGGGGCTACAATATCTCAATGAGGGACGCTGCGTCGCTTGATTTGGTTGATTGGCTCATGAAAAGACCGGAATGGAAGATCATGGGCGGGAAGGATCATTTTCTTGTTGCTGGAAGGATAACATGGGATTTCAGGAGGTTGAGTGAGGAAGAATCTGATTGGGGGAACAAGCTTCTGTTCTTGCCTGCGGCAAAGAACATGTCTATGCTTGTGGTTGAATCCAGTCCTTGGAATGCCAATGATTATGGGATCCCTTATCCGACATATTTTCACCCTGCCAAAGATGAAGATGTTTTTGTTTGGCAGGATAGAATGAGGAAGTTGAAGAGGAAATGGTTGTTCTCATTTGCAGGAGCGCCTCGCCCGGACAATCCGAAATCCATTAGGGGGCAGATAATTGAGCAGTGCAGGAGTTCAAAAGTTGGAAAGCTCTTGGAGTGTGATTTCGGGGAGAGCAAATGCCATTCCCCTAGCAGCATTATGCAGATGTTTCAGAGTTCACTATTCTGCCTTCAGCCACAGGGCGATTCGTACACGAGAAGATCCGCTTTTGATTCAATGCTGGCTGGTTGCATTCCTGTTTTCTTCCATCCGGGTTCAGCTTATACACAATATACTTGGCATCTTCCTAAGAATTACACCAAGTATTCCGTGTTCATCCCTGAGGATGATATTCGCAAGAGGAATGTGAGCATTGAGGAGAGGCTTAGTGAGATTCCACCGGAGCAAGTGAGCATCATGAGGGAGGAGGTTATTAGTCTCATTCCTAGGTTAGTGTATGCAGATCCTCGTTCCAAGTTAGAGACCCTTAAGGATGCGTTTGATGTTTCGGTGCAAGCAATTATTGACAAGGTTACCAATCTGAGGAAGGACATGATCGAGGGCCGCACAGATGAGAACTTCATTGAGGAGAACAGTTGGAAGTATGCATTGTTGGATGAGGGGCAGCGCGAGGTTGGGCCTCATGAATGGGATCCTTTCTTCTCAAAGCCGAAGGATGGCAATGGGGAATCCAAAGAAACTCTTGGAACTTATATAGTTCAACTACACCCTCATGGCAAAACCAGCACCCTCTTCACCTCCAAACAAAACTGGCACCTTTCCTTCATTGAACAAATCATCTCTTCCAACGAAGACCCCTCGTCGCGCCTCCTCTATTCCTACCACTCCGCCATGGACGGTTTTGCGGCTAGTCTAACCGACTCCGAGTTCAAATACTTGCAAAATTTGCCTGATGTTCTATCCATTAAACCGGACAGGTTGCTTCAGCTTCAAACCACCTACTCTTACAAATTCTTGGGGCTTAACCCTGCTAGAGAAAACGGTTGGTATCAATCCGGATTTGGCCGCGGAACCATAATCGGAGTTCTAGACACCGGAGTGTGGCCGGAGAGTCCTAGTTTCAACGATCAAGGGATGCCGCCGGTTCCGAAGAAGTGGAAAGGTATATGCCAACAAGGACAAGCCTTTAACTTTTCTAATTGTAACAGAAAACTCATTGGTGCGAGGTACTTCACAAAAGGTCACCTTGCGGTTTCGCCTTCGAGGATTCCGGAGTATCTCTCTCCCAGGGACTCCTCTGGCCACGGCACACATACCTCATCCACGGCAGGTGGCGCTCCGGTCACCATGGCAAACGTGTTCGGGTATGCGGCCGGCGTGGCCAGAGGAATGGCACCGGGTGCTCACATTGCAGTTTACAAAGTCTGCTGGTTCAATGGCTGCTACAATTCCGATATCATGGCGGCCATGGATGTTGCGATTCGCGACGGCGTGGACGTCCTCTCTTTGTCAATAGGCGGCTTTCCGGTGCCTCTTTTCGACGATAGCATCGCCATTGGAAGCTTCAGAGCAATGGAGCATGGAATTTCGGTCATTTGTGCAGCAGGGAATAATGGACCTACAGCAATGTCTGTTGCCAATGAAGCTCCGTGGATTGCCACGATCGGCGCAAGTACAGTGGATAGAAAATTTCCGGCTATCGTCCGCTTGGCGAACGGAAAGATTCTCTATGGAGAATCAATGTATCCGTTCAACAGGCGAACGCGAACCGGAGAAGAACTCGAGGTAGTTTATTTGTCTAATGAAGACACAGAGTCTCAGTTTTGCCTCAGAGGCTCTCTTCCAAGGGAGAAGGTGAAAGGAAAAATGGTTGTTTGTGACAGAGGTGTTAATGGCAGATCAGAGAAGGGACAGGTTGTGAAGGAAGCTGGTGGTGCTGCTATGATTCTGGCGAATACAGAGTTGAATTTGGAGGAAGATTCCGTGGATGTTCATGTTCTGCCTGCAACTCTGATAGGATTTGATGAATCAGTTATCCTGAAGAATTATATAAACTCCACTGCAAGGCCTCTGGCTCGAATCCAATTCGGAGGAACTGTGATTGGAAGGACCAGAGCTCCACAAGTGGCAAGGTTCTCGGCCCGAGGGCCGAGTTATTCCAATCCTTCGATCCTTAAACCGGACGTTATAGCTCCGGGAGTTAACATAATTGCGGCCTGGCCTCAGAACCTCGGTCCGACCGGGCTCCCAGAAGATTCTAGGAGAGTGAACTTCTCTGTTATGTCTGGTACTTCAATGTCTTGTCCTCATGTTAGTGGAATAGCCGCGTTAATCCGCTCGGCTCACCCTGCATGGTCTCCTGCCGCCGTCAAGTCAGCTATCATGACGACCGCAGAGGTAACAGACCGTGCAGGGAGACCTATACTCGACGAGGACAAGCAGGCTAGCGTTTTCGCTACCGGCTCCGGGCATGTGAATCCTCAGAGAGCCTTGAATCCGGGGCTAGTATATGATATTCGGCCGGAGGATTATGTGGCACACCTTTGCAGCCTTGGATACACAATGTCAGAGGTCTTTAGCATAACTCATAGGAATGTGAGCTGCCATGAGATCTTGAAGGTGAATAGAGGGTTCAGCCTTAACTATCCTTCATTCTCGGTTAGTTTTAAGGATGGGATGAGCAGGAAGATGTTTAGCAGAAGAGTTACAAATGTTGGGAGTCCTAATTCCATTTACTCGGTGGAGGTTATGGCACCAGAGGGTGTGAAAGTGATAGTGAAACCAAAGAAGCTTTTCTTCAAGAGAACAAATCAAAGCTTGAGTTATAGGGTTTGGTTTTTGTCAAGAAAAAGAGTTAAGAAAGGTAATGGGATGGATTTCGCACAAGGCCATTTGACTTGGTTGCACTCTCAGAAAGGTTCTTACAGGGTTAGAAGCCCAATTGCAGTGACTTGGAAGTCTTAG 3915 0.4848 MRRRPVTGVLSDQMEKSAPKNQNSRICFLAALSAFFWLLLLYFHFVFINPTTFDANKDEDDDSNELPVQRLQPPPRKQIGFPDLDSDSQNLNKNPNNSPLKERNFPFMKALTTADNKNDPCAGKYIYVHDLPSRFNEDMLKECRSLSLWTNMCKFTTNAGLGPPLENVEGVFSNTGWYATNQFAVDVIFSNRMKQYECLTKDSSIAAAFFVPFYAGFDIARYLWGYNISMRDAASLDLVDWLMKRPEWKIMGGKDHFLVAGRITWDFRRLSEEESDWGNKLLFLPAAKNMSMLVVESSPWNANDYGIPYPTYFHPAKDEDVFVWQDRMRKLKRKWLFSFAGAPRPDNPKSIRGQIIEQCRSSKVGKLLECDFGESKCHSPSSIMQMFQSSLFCLQPQGDSYTRRSAFDSMLAGCIPVFFHPGSAYTQYTWHLPKNYTKYSVFIPEDDIRKRNVSIEERLSEIPPEQVSIMREEVISLIPRLVYADPRSKLETLKDAFDVSVQAIIDKVTNLRKDMIEGRTDENFIEENSWKYALLDEGQREVGPHEWDPFFSKPKDGNGESKETLGTYIVQLHPHGKTSTLFTSKQNWHLSFIEQIISSNEDPSSRLLYSYHSAMDGFAASLTDSEFKYLQNLPDVLSIKPDRLLQLQTTYSYKFLGLNPARENGWYQSGFGRGTIIGVLDTGVWPESPSFNDQGMPPVPKKWKGICQQGQAFNFSNCNRKLIGARYFTKGHLAVSPSRIPEYLSPRDSSGHGTHTSSTAGGAPVTMANVFGYAAGVARGMAPGAHIAVYKVCWFNGCYNSDIMAAMDVAIRDGVDVLSLSIGGFPVPLFDDSIAIGSFRAMEHGISVICAAGNNGPTAMSVANEAPWIATIGASTVDRKFPAIVRLANGKILYGESMYPFNRRTRTGEELEVVYLSNEDTESQFCLRGSLPREKVKGKMVVCDRGVNGRSEKGQVVKEAGGAAMILANTELNLEEDSVDVHVLPATLIGFDESVILKNYINSTARPLARIQFGGTVIGRTRAPQVARFSARGPSYSNPSILKPDVIAPGVNIIAAWPQNLGPTGLPEDSRRVNFSVMSGTSMSCPHVSGIAALIRSAHPAWSPAAVKSAIMTTAEVTDRAGRPILDEDKQASVFATGSGHVNPQRALNPGLVYDIRPEDYVAHLCSLGYTMSEVFSITHRNVSCHEILKVNRGFSLNYPSFSVSFKDGMSRKMFSRRVTNVGSPNSIYSVEVMAPEGVKVIVKPKKLFFKRTNQSLSYRVWFLSRKRVKKGNGMDFAQGHLTWLHSQKGSYRVRSPIAVTWKS* 1305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1532 1304 PRINTS Subtilisin serine protease family (S8) signature 672 691 IPR015500 -
Amo16g1532 1304 PRINTS Subtilisin serine protease family (S8) signature 1079 1095 IPR015500 -
Amo16g1532 1304 PRINTS Subtilisin serine protease family (S8) signature 748 761 IPR015500 -
Amo16g1532 1304 MobiDBLite consensus disorder prediction 83 101 - -
Amo16g1532 1304 Gene3D - 878 1018 - -
Amo16g1532 1304 CDD PA_subtilisin_like 885 1011 - -
Amo16g1532 1304 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 553 648 IPR037045 -
Amo16g1532 1304 CDD Peptidases_S8_3 645 1115 IPR034197 -
Amo16g1532 1304 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.2 562 1301 - -
Amo16g1532 1304 SUPERFAMILY Subtilisin-like 647 1152 IPR036852 GO:0004252|GO:0006508
Amo16g1532 1304 Pfam PA domain 913 992 IPR003137 -
Amo16g1532 1304 Pfam Fibronectin type-III domain 1197 1300 IPR041469 -
Amo16g1532 1304 Gene3D Peptidase S8/S53 domain 674 1161 IPR036852 GO:0004252|GO:0006508
Amo16g1532 1304 MobiDBLite consensus disorder prediction 56 102 - -
Amo16g1532 1304 SUPERFAMILY Protease propeptides/inhibitors 583 646 - -
Amo16g1532 1304 Pfam Subtilase family 672 1119 IPR000209 GO:0006508|GO:0008236
Amo16g1532 1304 Pfam Exostosin family 121 458 IPR040911 -
Amo16g1532 1304 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 562 1301 IPR045051 -
Amo16g1532 1304 Pfam Peptidase inhibitor I9 567 647 IPR010259 -
Amo16g1532 1304 ProSiteProfiles Serine proteases, subtilase domain profile. 650 1148 - -
Amo16g1532 1304 Gene3D - 1165 1302 - -
Amo16g1532 1304 ProSitePatterns Serine proteases, subtilase family, serine active site. 1080 1090 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1532 Amo-Chr16 28255316 28266091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1532 567 1304 Subtilisin-like Serine Gene Family AT1G04110 68.316 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1532 - - pvu:PHAVU_001G165300g 1835.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1532 16 28255316 28266091 Amo06g0313 06 4574247 4584200 hybridization