Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1484 ATGACTATATTTGCCACACTAATTCACCATATCCAATCAACAACTATATCAACAATCACAAATAAAACCACACCTACCATACAACAGTCTACCAAGCCAACATCATTCCTGAACCCCAGAAGTGAAAGCCACATCGTAGGGAGCTTGAAGCAGTCATCGTCGACAGCAAACTGGGCAAGAAACACGCTTCCTCCATGGCTTGATGCCAGCCTCCCTGGAGACTTTAGGTTTGATCCACTTGGTCTGGAAGCTAGTGCACTGCAGGTGGGCAATGCTGGGTGCTGCGGGCATCTTCATTTCCGAATTTTTAACAAGTCAAGCTGTGTCAACACCGACCCTATATTCCCAAACAACAAGTTCACTGGCACCCATGTTAGTTACCCTGGTGGCCTCTGGTTTGACCCTCTCGAATGGGACTCTCCTAAAAAGATCAAGGAATTGAGAACTAAAGAGATCAAGAATGATGTGAAAATTATGGTATCAGAGCCAAAGGTTGCTGATTAA 504 0.4504 MTIFATLIHHIQSTTISTITNKTTPTIQQSTKPTSFLNPRSESHIVGSLKQSSSTANWARNTLPPWLDASLPGDFRFDPLGLEASALQVGNAGCCGHLHFRIFNKSSCVNTDPIFPNNKFTGTHVSYPGGLWFDPLEWDSPKKIKELRTKEIKNDVKIMVSEPKVAD* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1484 167 Gene3D Chlorophyll a/b binding protein domain 83 154 - -
Amo16g1484 167 Pfam Chlorophyll A-B binding protein 121 154 IPR022796 -
Amo16g1484 167 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 104 159 IPR001344 GO:0009765|GO:0016020
Amo16g1484 167 SUPERFAMILY Chlorophyll a-b binding protein 57 154 - -
Amo16g1484 167 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC-RELATED 104 159 - -
Amo16g1484 167 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC-RELATED 58 85 - -
Amo16g1484 167 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 58 85 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1484 Amo-Chr16 27213463 27215778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1484 105 161 Chloroplast and Mitochondria Gene Families AT3G61470 67.797 9.61e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1484 K08908 - tcc:18609005 90.5077