Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1448 ATGAATATTCGGGGTCAGGGTCAGGGTCCGCCTCCGGTTCCGGCAGCGGCGGCAGGGATGATGGATGGGATTGGGGTTCCGGTTGCTCCGAATCCGATAAACAGGAAGAAGGGGACCGGGGTGAGGGCGTGGCTGCTTCTCGATTCCAGTGGTCAGAAGCAGGTTGTGGAGGCCGGCAAGCACGCCATCATGCGGCGCACRGGTCTCCCCGCCCGYGACCTCCGTATCCTCGACCCCCTCCTGTCCTACCCCTCGACCGTGCTAGGCCGTGAGAGGGCCATCGTGATCAACCTCGAGCACATCAAGGCCATCATCACCGCCCACGAGGTCCTCCTCCTCAACTCCCGCGACCCCTCCGTGACCCCTTTCGTGGAGGAGCTCCACTCRAGGATCCTCCGGCACCACCAAGTCCAGGGAGCTGCTGCGGCAGCTGCGGCTTCGGATGATTTCAAGCTGAGCAAAGTGTACGACTCGGAAGAAGGGCAATCAAGAGAGGGACAGGATGAAGATGAAGATCTCGATCCCGTTGGGGAGCAAGTGAAAGCCCAATCGAAGCAGAATGGTATYCAGAACGGYGATGGCATGAAGATCCTGCCGTTCGAGTTTGTGGCACTGGAGGCCTGCCTGGAGGCTGCGTGCAGTGTGTTAGAGAACGAGGCAAAAACCCTGGAACAGGAGGCCCACCCTGCCTTGGACAAGCTCACTTCCAAGATCAGTACTCTCAATTTGGAACGGGTTCGTCAAATTAAGAGCCGMCTTGTTGCCATCACTGGTCGCGTTCAGAAGGTAAGGGATGAGTTAGAACACTTGCTCGATGACGACGACGATATGGCTGAGATGTATCTCACCGACAAGTTACAACAGCTCCACAGTTCTTCTGCCTCCTCTATAAATGATGATGATGTTGACAATGACCACCATAATCAGCTTGATGTCGATGACAGGCAMGTGTACATCATTCCTCCTGAAATATCACTGGAAGAGGGTGGAGCTGCTGCAAGCGATGACGATAATCAACATGATGATGACAGGTTATTAGTGGGAGTTAGCAGGGACAGCCGTGCTAGCACTACCTACAGTACCACAACTAAGCATCTTGATGTGGAGGAGCTTGAGATGCTCYTGGAAGCATATTTTGTGCAAATCGATGGCACACTCAACAAGCTCTCTACTCTAAGGGAATACGTGGACGACACAGAGGACTACATCAACATAATGCTGGATGACAAACAGAATCATCTGCTCCAAATGGGAGTCATGTTRACCACAGCAACTCTGGTAGTGAGTGCCTTTGTCGTTGTCGCTGGTATTTTYGGCATGAACATTCATATTGAGCTATTTGATTCAAATAYTACCGGGAATRGAGAGTTCTTYTGGACTGTTGGGGGCAGTGCTGCTGGAACCATTTTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGTACAAACGCTTGCTCGAGTAG 1461 0.5236 MNIRGQGQGPPPVPAAAAGMMDGIGVPVAPNPINRKKGTGVRAWLLLDSSGQKQVVEAGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITAHEVLLLNSRDPSVTPFVEELHSRILRHHQVQGAAAAAAASDDFKLSKVYDSEEGQSREGQDEDEDLDPVGEQVKAQSKQNGIQNGDGMKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDDDMAEMYLTDKLQQLHSSSASSINDDDVDNDHHNQLDVDDRXVYIIPPEISLEEGGAAASDDDNQHDDDRLLVGVSRDSRASTTYSTTTKHLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDSNXTGNXEFFWTVGGSAAGTIFLYVVAIAWCKYKRLLE* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1448 486 Coils Coil 206 226 - -
Amo16g1448 486 Pfam CorA-like Mg2+ transporter protein 365 472 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Amo16g1448 486 MobiDBLite consensus disorder prediction 155 188 - -
Amo16g1448 486 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 35 486 IPR039204 -
Amo16g1448 486 Gene3D Magnesium transport protein CorA, transmembrane region 176 414 - -
Amo16g1448 486 CDD Mrs2_Mfm1p-like 44 484 IPR039204 -
Amo16g1448 486 Gene3D - 31 115 - -
Amo16g1448 486 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 35 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1448 Amo-Chr16 25739620 25741546 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1448 44 486 MRS2 Gene Family AT3G19640 65.275 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1448 - - adu:107488664 832.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g1448 16 25739620 25741546 Amo06g0562 06 8298280 8300729 hybridization