Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1406 ATGGAGAAACTCAGAATTCTAATTGTTCGGAATACAGTGTTTTCAACAGCACCAAGTCATCTTCCAAATATCATTCCCACTAATTTTCATCCCCACAGGATTGTTGATCTCAAGCTACCTCACAGTGCTCTTAAATTGGAAAGGCCATTTCAGGTATTTGAGGATTTGACATGTATCAACCTCTCCCAATGTCAATCCGTTACACATGTCCCGGATATGCCTGGAGCTAAAAGCCTGAGAGTCCTCACACTTGACAAATGCAATAAACTGGTAGGATTTGATGAATCCATTGGATTTATGCCAAACCTTGTGTATTTTAGTGCTTCGGAATGCAGTAAGCTCAAACATTTTGTACCAGAAATGTATTTGCCGTCTCTCGAAGTGCTTTCATTTTACTTTTGTAAAAGCCTTCAAAGTTTCCCAGAAATCATGCAAGAGATGGACAAACCATTAAAGATTAACTTGGCAAATTCTGCAATTGAGGAGTTCCCGAATTCCGTTGGTAATCTTACAGGGCTTGAGCACATAGATATCTCTAAATCCAAAAGACTCCAGTATCTACCAAGTAGCTTCTTGATGTTGCCAAAACTTTTCACATTGACAATAGACGGATGTTCTCTGCTTGGAAGATCATTTAAAAAGTTCAAAGGACACAACAGTCCAAATATAAGGAGACTGAATTTCAGTGGTGCTAATCTTTCAGATGAAGATCTTCATCCAATTCTTCATATTCATCAGAAGTGGGAAGGCATCAATGTATCAAACAATTGTTTTTTATCCCTCCCAAAGTGCATTGAAGGATTTTTGCACTTGAAAATTCTTGACGTGAGTTATTGTAATAATCTTATGATAATTCCAGAACTTCCATCAAGCATTCAAAAAGTAGATGCAAGATATTGCCTATCCTTAACTCCACAGTCCTCAACCATGCCATTGTCCAAGATTTTACAAGAGACTAAAAGAATTGAAGTTGTGATGCCAAAAAAGGAGATTCCCAATTGGCTTGACTACGATTGCAGCAAAGATATTCCTCTGTTTTGGGCTCGGCGAAAGTTCCCTGTTGTTGCTTTAGCATTCATGTTTGGGAGAGCCACTGGCAGTGATATTGATGAGACATTGATGAAGGCTCTAGACTTCTGGCCTCAAATTGCTTCATCCAAATCCTACACTGTTGGTCTCAACTTGTTTATAGAAGGCCAACAAATATTTCCGGAAAAGTCCAAATATTTCAATGTTGGGGAAGATCATGTGTTACTTTTTGATCTTCGAACTTTGTTCAGTGACAAAGAGTGGCATGATCTTGATGCATATATTGGAGATGATTGGAAAGCCATTCATGTTGTATGTGAATCAACCTTAACTCTGAATCATTGGGGAGTTTATGTTTACAAGGGAGAGACAAACATGGATGATATTTATTTCAAGCATCTTCCCAACCACAAATTGTCAAGCGAGTTAGTTCTAGAAAGAAGTCCGCAACAAACTCGGCAAAGAATTGGACAAGTGATAGATAATTTGAATCCAACAGAAACATTTGACAATGAGCATTTGTCTCTTGTCTACAAGATGGCTAAGGCTAACGAAGCTGCTTTGTCTTCTAACTATGGGGCAAGTTTGAAGAAAGAATCAGAAGAATCTAATTGGGACGTGTTGCGGTTAATAGAGTTGATGAAGGAGAATGTGCCAAAAGATATTGCTGATTCATACCCTGGTCAAATACAAGCTGTACAAGAATTCGCAGAAGAGTTTTTTAAGGCACGTGCACAATTTATGATGGAGAAAGACTGCGACACGTTGAATATTGGTATGATGATTGCTTTAGAGGAATACCATATTTTTGGACCTCCAACTCGTCGTTATTGGGGAAGAATAGATTTAAAACATGCAGATGATCCAACATTCAAAGCAGTGATGAGGAGGGCATTCCAAGAATCATGGAGAATTGAAGAACGCGCCAAAGCACACAATAGAAGGATGATTCCCATTCCCATCCATATGGGGGGAATCATAGAGAAAGATGCTATGGACTCTAATAAATCATATGGTAAATTGAAGGCATGTATTACTTATACTAATGAAGTACTAGCAGTTTCTGATGAATATTTGCTGGAAGCAACGTATATGAGAGCACATGAAAATATGGAAAATGAAGTCATGTCAGAATGGGGAAGGTTAGAATTGGCATTATGTGACATGTTCAGATCAAGAATGCGAAGATCATTGTTTGGTTGGAGAAAGCTCATGATTCCTGGAGCTAGTACTAAGAAGACCTCTTATCGGACAATTAGAGTGGCACACGAAGATCAAGACACTCATGATAATAATCGAATGCAGCATAATAAGCTGTGGCGGATCCAGATTCCAAGGTACCTTTTTTTGGAAATTTGGTCTGTGGTACTTGGGATGGTCTAA 2412 0.386 MEKLRILIVRNTVFSTAPSHLPNIIPTNFHPHRIVDLKLPHSALKLERPFQVFEDLTCINLSQCQSVTHVPDMPGAKSLRVLTLDKCNKLVGFDESIGFMPNLVYFSASECSKLKHFVPEMYLPSLEVLSFYFCKSLQSFPEIMQEMDKPLKINLANSAIEEFPNSVGNLTGLEHIDISKSKRLQYLPSSFLMLPKLFTLTIDGCSLLGRSFKKFKGHNSPNIRRLNFSGANLSDEDLHPILHIHQKWEGINVSNNCFLSLPKCIEGFLHLKILDVSYCNNLMIIPELPSSIQKVDARYCLSLTPQSSTMPLSKILQETKRIEVVMPKKEIPNWLDYDCSKDIPLFWARRKFPVVALAFMFGRATGSDIDETLMKALDFWPQIASSKSYTVGLNLFIEGQQIFPEKSKYFNVGEDHVLLFDLRTLFSDKEWHDLDAYIGDDWKAIHVVCESTLTLNHWGVYVYKGETNMDDIYFKHLPNHKLSSELVLERSPQQTRQRIGQVIDNLNPTETFDNEHLSLVYKMAKANEAALSSNYGASLKKESEESNWDVLRLIELMKENVPKDIADSYPGQIQAVQEFAEEFFKARAQFMMEKDCDTLNIGMMIALEEYHIFGPPTRRYWGRIDLKHADDPTFKAVMRRAFQESWRIEERAKAHNRRMIPIPIHMGGIIEKDAMDSNKSYGKLKACITYTNEVLAVSDEYLLEATYMRAHENMENEVMSEWGRLELALCDMFRSRMRRSLFGWRKLMIPGASTKKTSYRTIRVAHEDQDTHDNNRMQHNKLWRIQIPRYLFLEIWSVVLGMV* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1406 803 SUPERFAMILY L domain-like 4 309 - -
Amo16g1406 803 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 517 IPR044974 GO:0006952
Amo16g1406 803 Gene3D Ribonuclease Inhibitor 153 325 IPR032675 -
Amo16g1406 803 Gene3D Ribonuclease Inhibitor 1 152 IPR032675 -
Amo16g1406 803 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 1 517 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1406 Amo-Chr16 24774124 24777207 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1406 25 210 WRKY Transcription Factor Family AT4G12020 33.333 1.26e-18 89.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1406 - - aip:107611494 1488.01