Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1405 ATGTCAGAAAAATCTGAAAGTCGCGGAAGCTTAGAAAGTCTGCAAAAGACCGTTTTATATGACATGGGTGAGGAGACAATAACTGACCTTGGCAGTGAATTTAAGGGAGGATATGAAATCAAACGGAGGCTTCGCCACAAAAGAGTACTTCTAGTTCTTGATGATGTTAATTCAATAACACAATTGGAATCACTGGCTGGAGGGCATGATTGGTTTGGTTCAGGCAGCAGAATCATTATAACAACAAGGGATACTGATATGGTAGACAAGCATGTGATGGGTGATGTTGTCACCAAGAAATACAAGATGGAGGAGCTAAATGATGATGATTCCTTGGAACTCTTTTCTTGGCATGCTTTCAACAGGAAGGAGCTAAATGATGATGATTCCTTAGAACTTTAA 402 0.398 MSEKSESRGSLESLQKTVLYDMGEETITDLGSEFKGGYEIKRRLRHKRVLLVLDDVNSITQLESLAGGHDWFGSGSRIIITTRDTDMVDKHVMGDVVTKKYKMEELNDDDSLELFSWHAFNRKELNDDDSLEL* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1405 133 Gene3D - 1 94 IPR027417 -
Amo16g1405 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 127 IPR027417 -
Amo16g1405 133 Pfam NB-ARC domain 12 126 IPR002182 GO:0043531
Amo16g1405 133 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 124 IPR044974 GO:0006952
Amo16g1405 133 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1405 Amo-Chr16 24773060 24773461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1405 40 119 WRKY Transcription Factor Family AT5G45050 42.500 1.08e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1405 - - aip:107611494 236.498