Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1394 ATGTCAGTGGAAGCAGATCGGATGGGCATAGAGGAAGAGACGGAGACGGTGGCCACCGCCGTGGAAACCAACAATAAGCTCAAAGACCGAAAGGTGTCTTGGGCTAAGCTCCGCCGCGTAGATTCTCTCAACTTAGAAGCTGGAAGAGTTTCTCTCAGCGGCAGCCATGGCTCTAAGTTGAGTTGGAGAACAACGTTGAGTTTGGCATTTCAAAGTATAGGAATTGTTTATGGCGATATTGGAACATCTCCTCTGTATGTGTATGCCAGCACCTTTACTGATGGAATAAAAAACAATGATGATGTTCTTGGTGTCTTATCCCTAATCATCTACACTATTGTGCTCATTCCTATGCTTAAATACGTCTTCATTGTGTTATGGGCTAATGACAACGGCAACGGTGGAGCATTTGCATTGTATTCGCTGATATGCAGACACTTAAAGGTTAGTTTGGTTCCAAATCAACAACCAGAAGACAGAGAACTTTCTAACTATAAACTGGACACACCGTCTAACAAGTTAAAACGAGCCCAAAGACTGAAGCAGATGCTTGAGAACAGTCACACTGCTCGTATTCTTCTTTTGCTTGCAACCATAACAGGAACTTCCATGGTCATAGGAGACGGGATTCTTACTCCTTCAATTTCAGTCCTTTCTGCCGTAAGTGGAATCAGTACGTCACTGGGTCAAGAAGCTGTAGTGGGGATCACTATAGTGATCTTAATTGTCCTATTTTCGATGCAACGATTCGGTACGGATAAAGTGGGATTCTCGTTTGCACCAATTATCTTTGTGTGGTTTGCATTCATTGGGGGGATCGGCCTCTACAATTTATTCAAATATGACCTTGGAGTGTTACGGGCTTTTAATCCAAAATATATAGTCGATTACTTCAAACGCAACGGTAAGCAAGGATGGTTATCACTTGGTGGAGTGTTTCTATGTATAACAGGATCTGAAGCCATGTTTGCAGACTTGGGTCACTTTAATGTACGAGCAATCCAAATGAGCTTCTCTTTCATTACATGTCCTGCAATATTRGCTGCATATATTGGGCAAGCAGCATTTCTACGGAAGTTYCCTGGAAAAGTGAAGAATACTTTCTACGAAAGTCTACCACACTCCATATATTGGCCAACATTTGTGGTGGCTGTTGGTGCTGCTATCATAGCAAGCCAAGCAATGATTTCAGGAGCATTTTCCATCATATCGCAGGCCCTGAGTCTAGGTTGTTTCCCACGAGTTAAGGTTGTGCATACTTCTACTAAACACCAGGGTCAAGTGTATATTCCAGAGGTCAACTATATGTTCATGATTGCATGTATTATTGTTTGTGCTGCCTTCAAGACCACAGAAAAGATTAGTCACGCATACGGAATTGCCGTTATTGGGGATATGATGATCACAACAACGTTAGTTTCGTTGATAATGCTGGTGATATGGAAGAAGAGTATATGGCAAGTTGCTATCTTCTTTTTGGTATTCGGTTGCACAGAAGCTCTATATTTCTCATCTCAGATAACCAAATTCACGGGTGGAGGCTTTCTTCCAATTGCTTCTGCTTTGTTCGTAACAACAGTAATGGGAATCTGGCATTACGTGCACAAAGAGAGATACATGTTTGAGCTCAGAAACAAGGTTTCCAGTGAGTACATAAGAGAATTGGCCGTCAACCCAGACATAAGCCGAGTTCCGGGAATGGGGCTTCTCTACTCTGAGCTTGTTCAGGGGATTCCTCCAATATTCCCTCATCTTATTGCCAGTGTGTCATCCATCCATTCAGTCCTTGTCTTTGTTTCGATCAAGGCCATCCCTGTCAGCCGAGTTGCTTTGGAGGAGAGGTTCCTATTTCGCCATGTCGAGCCTAGAGAGTACCGAATGTTCCGTTGTGTGGTGAGGCACGGTTACAAGGATGGACTTGAAGATCCTATCGAGTTTGAATCCCAATTAATACAAAATCTTAAGGCCTTCATTCAACAAGAGAGTTTTATGCTTACTGAGGGGGCTGATGTAGCAGAAAGTAGTGATCAGATGGCACTCAAGGAAGCAGAAGCACAAGTATTGCAGGAAGGAACTAAAGTAAGGTCTGCTAATTCTTCCAGCAGAATAATTCCAAACAATAATAATCAAGGCATTGTGTCTCGTGCCTCCTCGGATCCCATTGTTCATGTGGCACCTAACAAGTCGTCCACTTTCTCTGATCCGCCCATCCAGGGTGCTGAAGATGAGGTCAAGTTCATAGACAAGGCAATGGAAAAGGGTGTGGTGTATATGTTAGGCGAAGCAGAGGTGGTGGCTCAACCAAATTCATCTTTYCTCAATAAGATAGTTGTCAACTATGYTTAYAGCTTCTTGAGAAAGAACTTCCGCCAAGGGGACAAGTTGATGGCAATTCCTCGTAAGAGACTTCTCAAGATTGGAATGACATATGAAATATAA 2439 0.4293 MSVEADRMGIEEETETVATAVETNNKLKDRKVSWAKLRRVDSLNLEAGRVSLSGSHGSKLSWRTTLSLAFQSIGIVYGDIGTSPLYVYASTFTDGIKNNDDVLGVLSLIIYTIVLIPMLKYVFIVLWANDNGNGGAFALYSLICRHLKVSLVPNQQPEDRELSNYKLDTPSNKLKRAQRLKQMLENSHTARILLLLATITGTSMVIGDGILTPSISVLSAVSGISTSLGQEAVVGITIVILIVLFSMQRFGTDKVGFSFAPIIFVWFAFIGGIGLYNLFKYDLGVLRAFNPKYIVDYFKRNGKQGWLSLGGVFLCITGSEAMFADLGHFNVRAIQMSFSFITCPAILAAYIGQAAFLRKFPGKVKNTFYESLPHSIYWPTFVVAVGAAIIASQAMISGAFSIISQALSLGCFPRVKVVHTSTKHQGQVYIPEVNYMFMIACIIVCAAFKTTEKISHAYGIAVIGDMMITTTLVSLIMLVIWKKSIWQVAIFFLVFGCTEALYFSSQITKFTGGGFLPIASALFVTTVMGIWHYVHKERYMFELRNKVSSEYIRELAVNPDISRVPGMGLLYSELVQGIPPIFPHLIASVSSIHSVLVFVSIKAIPVSRVALEERFLFRHVEPREYRMFRCVVRHGYKDGLEDPIEFESQLIQNLKAFIQQESFMLTEGADVAESSDQMALKEAEAQVLQEGTKVRSANSSSRIIPNNNNQGIVSRASSDPIVHVAPNKSSTFSDPPIQGAEDEVKFIDKAMEKGVVYMLGEAEVVAQPNSSFLNKIVVNYXYSFLRKNFRQGDKLMAIPRKRLLKIGMTYEI* 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1394 812 Pfam K+ potassium transporter 69 638 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g1394 812 Coils Coil 10 30 - -
Amo16g1394 812 TIGRFAM kup: potassium uptake protein 68 812 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g1394 812 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 26 811 IPR003855 GO:0015079|GO:0016020|GO:0071805
Amo16g1394 812 PANTHER POTASSIUM TRANSPORTER 5 26 811 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1394 Amo-Chr16 24514913 24522803 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1394 24 812 Inorganic Solute Cotransporters AT4G13420 59.696 0.0 971
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1394 K03549 - gmx:100814313 1216.06