Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo16g1382 ATGGCGGCAGGAGAGGGTGGAAGAAGGGTGCTGCTACTGTTGTTATTGTTTACCAGTAACTGCATTCTTCATTGGATGCCCGTTGCTGTTAATGGTAACACAGATCCGAATGATGCGGCAGCTATAAGGATTTTATTTCAATCTATGAACTCACCTTCACAGCTATGTTGGCAAGCGAATGGTGATGATCCGTGTGGACAATATTGGAAAGGCATAACATGCTCAAACAACCGAGTTACAGAGATTAAGTTATCCAATCTTAAACTAACGGGAACATTGCCTTATGGATTACAACCCTTGACATCTTTGACCAACCTAGACCTGAGTAGCAACAATCTTGGAGGTGGCATACCATACCAGCTTCCTCCAAATATGCAGCGCTTAAATCTGGCTTATAATAACTTCACTGGGACAATCCCTTACTCTATTTCTGATATGACCTCTCTTACAGACCTGAATCTTGGTCACAATCAGTTCCAGCAAGGATTGAACGTTAACTTCATGAAGCTTTCTACCCTCTCTTCATTGTGA 531 0.4237 MAAGEGGRRVLLLLLLFTSNCILHWMPVAVNGNTDPNDAAAIRILFQSMNSPSQLCWQANGDDPCGQYWKGITCSNNRVTEIKLSNLKLTGTLPYGLQPLTSLTNLDLSSNNLGGGIPYQLPPNMQRLNLAYNNFTGTIPYSISDMTSLTDLNLGHNQFQQGLNVNFMKLSTLSSL* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo16g1382 176 Pfam Leucine Rich repeat 101 115 IPR001611 GO:0005515
Amo16g1382 176 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 6 23 176 - -
Amo16g1382 176 SUPERFAMILY L domain-like 34 176 - -
Amo16g1382 176 Pfam Leucine rich repeat N-terminal domain 36 75 IPR013210 -
Amo16g1382 176 Pfam Leucine rich repeat 123 175 IPR001611 GO:0005515
Amo16g1382 176 PANTHER OS01G0253100 PROTEIN 23 176 IPR045271 GO:0004714|GO:0006468
Amo16g1382 176 Gene3D Ribonuclease Inhibitor 37 176 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo16g1382 Amo-Chr16 24286897 24288839 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo16g1382 9 176 Strubbelig Receptor Gene Family AT3G14350 56.213 9.01e-55 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo16g1382 - - aip:107646143 332.028